RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 TTC27Q6P3X3 843 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 PRSS42Q7Z5A4 293 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 CPEB2Q7Z5Q1 589 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 SMIM29Q86T20 159 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 ISCA2Q86U28 154 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 TMEM126BQ8IUX1 230 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 CROCCP3Q8IVE0 287 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 LRTM2Q8N967 370 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 KBTBD8Q8NFY9 601 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 ERMNQ8TAM6 284 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 LRRC8CQ8TDW0 803 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 PIK3R3Q92569 461 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 AP2M1Q96CW1 435 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 C5orf30Q96GV9 206 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 SENP5Q96HI0 755 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 CDKN2AIPNLQ96HQ2 116 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 ZNF354BQ96LW1 612 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 PANK2Q9BZ23 570 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 THAP9Q9H5L6 903 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 NECAP2Q9NVZ3 263 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 C6orf203Q9P0P8 240 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 GNPTGQ9UJJ9 305 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 OR1A2Q9Y585 309 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 FADS3Q9Y5Q0 445 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 TEX264Q9Y6I9 313 aa3.84□□□□□ -1.79
ECHDC1-223ENST00000534442 HSPG2P98160 4391 aa3.84□□□□□ -1.8
ECHDC1-223ENST00000534442 CHD5Q8TDI0 1954 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 WNK2Q9Y3S1 2297 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 TRAV18A0A075B6X5 111 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 A0A087X0K7 114 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 KLF18A0A0U1RQI7 1052 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 A0A1B0GTH9 108 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 ANKDD1BA6NHY2 528 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 A8MXQ7 604 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 RTCAO00442 366 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 ACOT8O14734 319 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 PGRMC2O15173 223 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 NGFP01138 241 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 ATP1A1P05023 1023 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 F7P08709 466 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 ADRB3P13945 408 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 CCNB1P14635 433 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 FOLR1P15328 257 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 CEACAM8P31997 349 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 ERVFC1-1P60608 527 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 OPCMLQ14982 345 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 IRF4Q15306 451 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 EXT1Q16394 746 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 XKR6Q5GH73 641 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 KCTD11Q693B1 232 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 ZFAND6Q6FIF0 208 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 WBP2NLQ6ICG8 309 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 RFWD3Q6PCD5 774 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 SIGLEC15Q6ZMC9 328 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 PAQR9Q6ZVX9 377 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 SCD5Q86SK9 330 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 ASPGQ86U10 573 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 PIGZQ86VD9 579 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 PEX5LQ8IYB4 626 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 RCOR2Q8IZ40 523 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 RTL3Q8N8U3 475 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 RELL2Q8NC24 303 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 CCDC47Q96A33 483 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 PPP1R16AQ96I34 528 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 HPDLQ96IR7 371 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 C4orf45Q96LM5 186 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 TGM7Q96PF1 710 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 TMEM237Q96Q45 408 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 PRMT1Q99873 361 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 C17orf62Q9BQA9 187 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 TIPINQ9BVW5 301 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 RSPO3Q9BXY4 272 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 SLC39A8Q9C0K1 460 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 DPEP3Q9H4B8 488 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 C5orf66Q9H5L9 145 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 METTL17Q9H7H0 456 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 SUDS3Q9H7L9 328 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 C10orf88Q9H8K7 445 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 CSNK1G1Q9HCP0 422 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 FGF22Q9HCT0 170 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 GPR173Q9NS66 373 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 INTS9Q9NV88 658 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 FETUBQ9UGM5 382 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 NAP1L2Q9ULW6 460 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 KIF3AQ9Y496 699 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 ALMS1Q8TCU4 4167 aa3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 HUWE1Q7Z6Z7 4374 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-223ENST00000534442 IGHV4-61A0A0C4DH41 118 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 C9J4A7 227 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 H3BMM5 538 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 BUB3O43684 328 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 BCAS2O75934 225 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 DFFBO76075 338 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 IGHV4-59P01825 116 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 CRYAAP02489 173 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 GPIP06744 558 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 NUDT17P0C025 328 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 SBK2P0C263 348 aa3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 AK4P27144 223 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-223ENST00000534442 SFTPDP35247 375 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms