RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 RNF122Q9H9V4 155 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 CLK4Q9HAZ1 481 aaKnown RBP2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 PARVBQ9HBI1 364 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 LPAR2Q9HBW0 351 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 DNAJC11Q9NVH1 559 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 ARL15Q9NXU5 204 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 GAR1Q9NY12 217 aaKnown RBP2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 NPAP1Q9NZP6 1156 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 PDP1Q9P0J1 537 aaPredicted RBP2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 COPS7AQ9UBW8 275 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 FETUBQ9UGM5 382 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF580Q9UK33 172 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF490Q9ULM2 529 aaPredicted RBP2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 DAPP1Q9UN19 280 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 EXO1Q9UQ84 846 aaKnown RBP2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC22A14Q9Y267 594 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 DLGAP4Q9Y2H0 992 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 LRCH1Q9Y2L9 728 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 PPP2R2CQ9Y2T4 447 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 WBP11Q9Y2W2 641 aaKnown RBP2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 DHRS7Q9Y394 339 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 BZW2Q9Y6E2 419 aaKnown RBP2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 IKBKGQ9Y6K9 419 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 FREM3P0C091 2139 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 DOCK7Q96N67 2140 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 COL7A1Q02388 2944 aa2.6□□□□□ -1.99
CHMP4A-208ENST00000534106 HEATR5BQ9P2D3 2071 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 LOC105371242A0A075B767 164 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 GOLGA6L10A0A0M3HER8 536 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 TCRBV7S3A2A0A539 114 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 CTAGE9A4FU28 777 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF814B7Z6K7 855 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 AKR1B15C9JRZ8 316 aaPredicted RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 TRIM77I1YAP6 450 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ABCD4O14678 606 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 WNT9BO14905 357 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 PGRMC2O15173 223 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 PSMD3O43242 534 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 PSTPIP1O43586 416 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 UGT2B11O75310 529 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 GCM2O75603 506 aaPredicted RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NXPH3O95157 252 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 GAS8O95995 478 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 CHEK2O96017 543 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 IFNB1P01574 187 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NUDT17P0C025 328 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 CCDC175P0C221 793 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SBK3P0C264 359 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 KITP10721 976 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF23P17027 643 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 S1PR1P21453 382 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 CPN2P22792 545 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 OMGP23515 440 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ABCD3P28288 659 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 PIK3CBP42338 1070 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC1A1P43005 524 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ALDH9A1P49189 494 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 PCYT1AP49585 367 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ARFIP2P53365 341 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NAP1L1P55209 391 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 CDKN2DP55273 166 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SUMO3P55854 103 aaPredicted RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 HILS1P60008 231 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 RPS13P62277 151 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SKP1P63208 163 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 EEF1A1P68104 462 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 IGLV3-21P80748 117 aaPredicted RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ZBED6P86452 979 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 HMGCS1Q01581 520 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SLAMF1Q13291 335 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 RAB32Q13637 225 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SERTAD2Q14140 314 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 EFTUD2Q15029 972 aaKnown RBP eCLIP2.59□□□□□ -1.994e-6■■■■□ 22.5
CHMP4A-208ENST00000534106 P2RY6Q15077 328 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 RPS6KA2Q15349 733 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 TBCCQ15814 346 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 STK11Q15831 433 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC18A3Q16572 532 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NRF1Q16656 503 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 PPP1R3AQ16821 1122 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 AARS2Q5JTZ9 985 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 EEF1A1P5Q5VTE0 462 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 AGAP6Q5VW22 663 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 OR2A2Q6IF42 318 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 NEPROQ6NW34 567 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 FAM180BQ6P0A1 224 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 FAHD2BQ6P2I3 314 aaPredicted RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 AAGABQ6PD74 315 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 RBM43Q6ZSC3 357 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 TMPRSS11BQ86T26 416 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 LINC00523Q86TU6 105 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 IFNEQ86WN2 208 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 TAGAPQ8N103 731 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ZCCHC24Q8N2G6 241 aaKnown RBP2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 MUC15Q8N387 334 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF615Q8N8J6 731 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ACOT4Q8N9L9 421 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 TRPV3Q8NET8 790 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ZFAND2BQ8WV99 257 aa2.59□□□□□ -1.99
CHMP4A-208ENST00000534106 ATG4AQ8WYN0 398 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms