RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 QPRTQ15274 297 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 RNPS1Q15287 305 aaKnown RBP13.8□□□□□ -0.2
CPSF1-211ENST00000533492 ZNF141Q15928 474 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 ZNF239Q16600 458 aaKnown RBP13.8□□□□□ -0.2
CPSF1-211ENST00000533492 SPANXN4Q5MJ08 99 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 MIPOL1Q8TD10 442 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 ARSGQ96EG1 525 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 THUMPD3Q9BV44 507 aaKnown RBP13.8□□□□□ -0.2
CPSF1-211ENST00000533492 LAT2Q9GZY6 243 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 MEAF6Q9HAF1 191 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 BEX4Q9NWD9 120 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-211ENST00000533492 MTORP42345 2549 aa13.8□□□□□ -0.2
CPSF1-211ENST00000533492 ESPNB1AK53 854 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 E9PBE3 544 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 ANKRD28O15084 1053 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 SIAH2O43255 324 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 PRKD3O94806 890 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 AGTR1P30556 359 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 NME5P56597 212 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 PHC1P78364 1004 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 FOXD4Q12950 439 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-211ENST00000533492 CASP8Q14790 479 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 FAM174BQ3ZCQ3 159 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 OGFOD2Q6N063 350 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 TNFAIP8L2Q6P589 184 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-211ENST00000533492 EIF3MQ7L2H7 374 aaKnown RBP13.79□□□□□ -0.2
CPSF1-211ENST00000533492 FCRLAQ7L513 359 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 OLIG3Q7RTU3 272 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 MGARPQ8TDB4 240 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 RNF128Q8TEB7 428 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 ZFP90Q8TF47 636 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 ABHD3Q8WU67 409 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 TMEM234Q8WY98 164 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 RAB8BQ92930 207 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 SRXN1Q9BYN0 137 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 ZNF350Q9GZX5 532 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 UBTD1Q9HAC8 227 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 SERINC1Q9NRX5 453 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 THAP1Q9NVV9 213 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 MARCOQ9UEW3 520 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-211ENST00000533492 WDR45Q9Y484 360 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 SETD2Q9BYW2 2564 aaPredicted RBP13.79□□□□□ -0.2
CPSF1-211ENST00000533492 HEATR5AQ86XA9 2040 aa13.79□□□□□ -0.2
CPSF1-211ENST00000533492 TMEM120BA0PK00 339 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 DIAPH2O60879 1101 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 UGT2B17O75795 530 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 UBTFL6P0CB48 400 aaPredicted RBP13.78□□□□□ -0.2
CPSF1-211ENST00000533492 PGCP20142 388 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 FPR1P21462 350 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 KHKP50053 298 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 TIGD2Q4W5G0 525 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 GPAT3Q53EU6 434 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 SLC25A53Q5H9E4 307 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 SAXO2Q658L1 398 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 HEPHL1Q6MZM0 1159 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 STAC2Q6ZMT1 411 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 C22orf34Q6ZV56 151 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 SPATA19Q7Z5L4 167 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 TUSC5Q8IXB3 177 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 SLC43A2Q8N370 569 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 TRIML2Q8N7C3 387 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 PIGTQ969N2 578 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 ROPN1LQ96C74 230 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 NEURL3Q96EH8 262 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 SLC35A5Q9BS91 424 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 POLE3Q9NRF9 147 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 BTNL2Q9UIR0 455 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 KCNE5Q9UJ90 142 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 GPR52Q9Y2T5 361 aa13.78□□□□□ -0.2
CPSF1-211ENST00000533492 A0A1W2PNR3 127 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 TRPC5OSA6NMA1 111 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 SDHDO14521 159 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 HDAC3O15379 428 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 ARHGEF9O43307 516 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 NTN1O95631 604 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 YES1P07947 543 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 KITP10721 976 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 WDR4P57081 412 aaKnown RBP13.77□□□□□ -0.21
CPSF1-211ENST00000533492 SESN3P58005 492 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 RAC3P60763 192 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 UFM1P61960 85 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 NKX6-1P78426 367 aaPredicted RBP13.77□□□□□ -0.21
CPSF1-211ENST00000533492 HPCAP84074 193 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 SKP2Q13309 424 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 ACKR1Q16570 336 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 BEX5Q5H9J7 111 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 ATG16L1Q676U5 607 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 C3orf33Q6P1S2 294 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 ZNF563Q8TA94 476 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 OIT3Q8WWZ8 545 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 ST8SIA1Q92185 356 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 OR5B2Q96R09 309 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 OR52E6Q96RD3 313 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 PANX1Q96RD7 426 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 ZBTB18Q99592 522 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 ACTR6Q9GZN1 396 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 COQ10BQ9H8M1 238 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 GP6Q9HCN6 339 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 AIG1Q9NVV5 245 aa13.77□□□□□ -0.21
CPSF1-211ENST00000533492 NKIRAS1Q9NYS0 192 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms