RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 GPR52Q9Y2T5 361 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 STYXL1Q9Y6J8 313 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 OR51F1A6NGY5 319 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 OTOL1A6NHN0 477 aaPredicted RBP7.4□□□□□ -1.22
CSRP1-218ENST00000533402 C6orf47O95873 294 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 MT-ND4LP03901 98 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 ASAH1Q13510 395 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 RCAN2Q14206 197 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 TMPRSS7Q7RTY8 843 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 PPP1R3BQ86XI6 285 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 KIAA1191Q96A73 305 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 CMTM7Q96FZ5 175 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 SIGLEC10Q96LC7 697 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 LMF1Q96S06 567 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 SPIN2AQ99865 258 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 SPIN2BQ9BPZ2 258 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 C20orf85Q9H1P6 137 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 SLCO5A1Q9H2Y9 848 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 CLEC4EQ9ULY5 219 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 SLC22A23A1A5C7 686 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 MEIS3P1A6NDR6 274 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 UMAD1C9J7I0 102 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 H0Y8G0 127 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 NFKBIEO00221 500 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 APBB3O95704 486 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 IL33O95760 270 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 FABP4P15090 132 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 APEX1P27695 318 aaKnown RBP7.4□□□□□ -1.22
CSRP1-218ENST00000533402 OR6N2Q8NGY6 317 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 CNN2Q99439 309 aaKnown RBP7.4□□□□□ -1.22
CSRP1-218ENST00000533402 TRAF4Q9BUZ4 470 aaPredicted RBP7.4□□□□□ -1.22
CSRP1-218ENST00000533402 ALG8Q9BVK2 526 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 ADAP2Q9NPF8 381 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 LYRM2Q9NU23 88 aaPredicted RBP7.4□□□□□ -1.22
CSRP1-218ENST00000533402 TESQ9UGI8 421 aaKnown RBP7.4□□□□□ -1.22
CSRP1-218ENST00000533402 KLK4Q9Y5K2 254 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 SCN4AP35499 1836 aa7.4□□□□□ -1.22
CSRP1-218ENST00000533402 OSMP13725 252 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 JUNBP17275 347 aaPredicted RBP7.4□□□□□ -1.23
CSRP1-218ENST00000533402 PTNP21246 168 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 DAOAP59103 153 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 TAF1AQ15573 450 aaPredicted RBP7.4□□□□□ -1.23
CSRP1-218ENST00000533402 DPYSL2Q16555 572 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 UBE2NLQ5JXB2 153 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 KCNRGQ8N5I3 272 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 CMKLR1Q99788 373 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 DERL2Q9GZP9 239 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 RNF11Q9Y3C5 154 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 RNF215Q9Y6U7 377 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 TRIP12Q14669 1992 aaPredicted RBP7.4□□□□□ -1.23
CSRP1-218ENST00000533402 ANKRD36A6QL64 1941 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 AQP7O14520 342 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 ARHGAP33O14559 1287 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 IFNGR1P15260 489 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 SHMT2P34897 504 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 COL9A3Q14050 684 aaPredicted RBP7.4□□□□□ -1.23
CSRP1-218ENST00000533402 NINJ1Q92982 152 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 SLC22A14Q9Y267 594 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 CORINQ9Y5Q5 1042 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 FTCDNL1E5RQL4 147 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 CLN5O75503 358 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 KLF8O95600 359 aaPredicted RBP7.4□□□□□ -1.23
CSRP1-218ENST00000533402 DIRAS3O95661 229 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 C4BPAP04003 597 aaKnown RBP7.4□□□□□ -1.23
CSRP1-218ENST00000533402 KLK1P06870 262 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 C6P13671 934 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 HOXB2P14652 356 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 RAB1AP62820 205 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 KIAA0895LQ68EN5 471 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 ANKLE1Q8NAG6 615 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 OR6K2Q8NGY2 324 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 NANOS1Q8WY41 292 aaKnown RBP7.4□□□□□ -1.23
CSRP1-218ENST00000533402 RBMXL1Q96E39 390 aaKnown RBP7.4□□□□□ -1.23
CSRP1-218ENST00000533402 MEGF10Q96KG7 1140 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 ZNF586Q9NXT0 402 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 FTSJ1Q9UET6 329 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 PTGDR2Q9Y5Y4 395 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 ARFGEF1Q9Y6D6 1849 aa7.4□□□□□ -1.23
CSRP1-218ENST00000533402 TMEM265A0A087WTH1 108 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 TMEM82A0PJX8 343 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 LOC730098B7Z3J9 87 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 RPL29P47914 159 aaKnown RBP7.39□□□□□ -1.23
CSRP1-218ENST00000533402 HOXA1P49639 335 aaPredicted RBP7.39□□□□□ -1.23
CSRP1-218ENST00000533402 MRPS34P82930 218 aaKnown RBP7.39□□□□□ -1.23
CSRP1-218ENST00000533402 RIN1Q13671 783 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 PCBP2Q15366 365 aaKnown RBP eCLIP7.39□□□□□ -1.232e-8■■■■■ 35.8
CSRP1-218ENST00000533402 MICAQ29983 383 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 POM121L1PQ3SYA9 428 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 PRAMEF19Q5SWL8 479 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 MBOAT1Q6ZNC8 495 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 CLDN22Q8N7P3 220 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 UCN3Q969E3 161 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 GLYATL1Q969I3 302 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 ORAI3Q9BRQ5 295 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 VAMP8Q9BV40 100 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 RYDENQ9NUL5 291 aaKnown RBP7.39□□□□□ -1.23
CSRP1-218ENST00000533402 MED16Q9Y2X0 877 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 SIGLEC6O43699 453 aa7.39□□□□□ -1.23
CSRP1-218ENST00000533402 SMPD1P17405 629 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms