RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TXNL4AP83876 142 aaKnown RBP27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 QPRTQ15274 297 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 GPAT3Q53EU6 434 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 SLC25A53Q5H9E4 307 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 FRRS1Q6ZNA5 592 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 EIF3MQ7L2H7 374 aaKnown RBP27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 FAM214BQ7L5A3 538 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 ZNF619Q8N2I2 560 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 GOLGA6L1Q8N7Z2 621 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 OSTF1Q92882 214 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 ZNF524Q96C55 264 aa27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 THUMPD3Q9BV44 507 aaKnown RBP27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 OPN3Q9H1Y3 402 aaPredicted RBP27.15■■□□□ 1.94
SSSCA1-207ENST00000533115 ETV2O00321 342 aaPredicted RBP27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 RFXANKO14593 260 aa27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 CYP7B1O75881 506 aa27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 NTN1O95631 604 aa27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 CD8BP10966 210 aa27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 SHC1P29353 583 aa27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 ANXA11P50995 505 aaKnown RBP27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 CARD18P57730 90 aa27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 HPCAP84074 193 aa27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 ZNF474Q6S9Z5 364 aaPredicted RBP27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 CLEC4MQ9H2X3 399 aaPredicted RBP27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 SLCO1B3Q9NPD5 702 aa27.14■■□□□ 1.94
SSSCA1-207ENST00000533115 HEATR5AQ86XA9 2040 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 GJE1A6NN92 205 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 DNAJA2O60884 412 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 UBTFL6P0CB48 400 aaPredicted RBP27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 PCYT1AP49585 367 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 MIER2Q8N344 545 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 GMPPAQ96IJ6 420 aaPredicted RBP27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 DACH2Q96NX9 599 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 VIPAS39Q9H9C1 493 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 PROCRQ9UNN8 238 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 LIPT1Q9Y234 373 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 SLC35A3Q9Y2D2 325 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 EMC9Q9Y3B6 208 aa27.13■■□□□ 1.93
SSSCA1-207ENST00000533115 HMGB1P1B2RPK0 211 aaPredicted RBP27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 TGDSO95455 350 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 H6PDO95479 791 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 PLGP00747 810 aaPredicted RBP27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 H2AFXP16104 143 aaPredicted RBP27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 POLR2JP52435 117 aaKnown RBP27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 CHRNEQ04844 493 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 FAM27E3Q08E93 113 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 SYPL1Q16563 259 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 MSANTD1Q6ZTZ1 278 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 OR9I1Q8NGQ6 314 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 PNPT1Q8TCS8 783 aaKnown RBP27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 DYDC1Q8WWB3 177 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 NRGNQ92686 78 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 ZG16BQ96DA0 208 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 TRNT1Q96Q11 434 aaKnown RBP27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 TIGARQ9NQ88 270 aa27.12■■□□□ 1.93
SSSCA1-207ENST00000533115 SH3D21A4FU49 640 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 SS18L1O75177 396 aaPredicted RBP27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 KRT75O95678 551 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 PGM1P36871 562 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 CD79BP40259 229 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 SELENBP1Q13228 472 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 TMEM176BQ3YBM2 270 aaPredicted RBP27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 COX20Q5RI15 118 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 ANKFN1Q8N957 763 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 ZNF610Q8N9Z0 462 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 FAM71CQ8NEG0 241 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 ATP6V1C2Q8NEY4 427 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 ZFP90Q8TF47 636 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 ST8SIA1Q92185 356 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 SLC39A3Q9BRY0 314 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 RMND5AQ9H871 391 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 GLRX2Q9NS18 164 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 SLC6A13Q9NSD5 602 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 ELOVL5Q9NYP7 299 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 CLEC4AQ9UMR7 237 aa27.11■■□□□ 1.93
SSSCA1-207ENST00000533115 PGCP20142 388 aa27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 CTBP2P56545 445 aa27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 TIGD2Q4W5G0 525 aa27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 DNAJC14Q6Y2X3 702 aaPredicted RBP27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 OR6K3Q8NGY3 331 aa27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 CPNE4Q96A23 557 aaPredicted RBP27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 ITCHQ96J02 903 aa27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 TCF7L2Q9NQB0 619 aa27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 ST6GALNAC1Q9NSC7 600 aaPredicted RBP27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 NDRG3Q9UGV2 375 aa27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 HRNRQ86YZ3 2850 aaPredicted RBP27.1■■□□□ 1.93
SSSCA1-207ENST00000533115 FAM234BA2RU67 622 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 POLR3GO15318 223 aaPredicted RBP27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 GOSR1O95249 250 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 ANP32DO95626 131 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 CHRM4P08173 479 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 ZCCHC18P0CG32 403 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 DNAJA1P31689 397 aaKnown RBP27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 KCNJ10P78508 379 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 ZNF239Q16600 458 aaKnown RBP27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 GTF2IRD2BQ6EKJ0 949 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 LRRC74BQ6ZQY2 392 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 HMGN2P46Q86SG4 172 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 GTF2IRD2Q86UP8 949 aa27.09■■□□□ 1.93
SSSCA1-207ENST00000533115 CDC20BQ86Y33 519 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms