RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ETV2O00321 342 aaPredicted RBP11.38□□□□□ -0.59
COPB1-208ENST00000532088 HCRTR2O43614 444 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 RASAL1O95294 804 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 EPPINO95925 133 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 OPN1SWP03999 348 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 UBTFL6P0CB48 400 aaPredicted RBP11.38□□□□□ -0.59
COPB1-208ENST00000532088 UQCRBP14927 111 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 PGCP20142 388 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 ATP6V1B2P21281 511 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 DNASE1L1P49184 302 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 ST13P50502 369 aaKnown RBP11.38□□□□□ -0.59
COPB1-208ENST00000532088 ZNF117Q03924 483 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 KLRB1Q12918 225 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 CBFBQ13951 182 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 GLYR1Q49A26 553 aaPredicted RBP11.38□□□□□ -0.59
COPB1-208ENST00000532088 IFI44LQ53G44 452 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 SLC22A16Q86VW1 577 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 SPPL2CQ8IUH8 684 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 CLIP4Q8N3C7 705 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 SMYD1Q8NB12 490 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 OR2M3Q8NG83 312 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 OR4K17Q8NGC6 315 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 PYURFQ96I23 114 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
COPB1-208ENST00000532088 UGT2B28Q9BY64 529 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 HES7Q9BYE0 225 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 UBQLN3Q9H347 655 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 ZNF703Q9H7S9 590 aaPredicted RBP11.38□□□□□ -0.59
COPB1-208ENST00000532088 KLHL1Q9NR64 748 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 TUBA8Q9NY65 449 aaPredicted RBP11.38□□□□□ -0.59
COPB1-208ENST00000532088 C15orf41Q9Y2V0 281 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 CACNA1GO43497 2377 aa11.38□□□□□ -0.59
COPB1-208ENST00000532088 A0A0G2JMM0 328 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 A0A1W2PPB8 328 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 A0A1W2PRS3 328 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 TCRBV3S1A0A5B6 114 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 C7orf72A4D263 438 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 CLDN24A6NM45 220 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 KIR3DP1A8MWS1 328 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 TPST1O60507 370 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 ZNF682O95780 498 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 CRYABP02511 175 aaKnown RBP11.37□□□□□ -0.59
COPB1-208ENST00000532088 SEMG1P04279 462 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 GPIP06744 558 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 SRD5A2P31213 254 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 DSCR4P56555 118 aaPredicted RBP11.37□□□□□ -0.59
COPB1-208ENST00000532088 GPR85P60893 370 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 EPS8Q12929 822 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 SLC25A53Q5H9E4 307 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 C1orf146Q5VVC0 180 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 CBLN3Q6UW01 205 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 PCSK4Q6UW60 755 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 CYP2R1Q6VVX0 501 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 RANBP3LQ86VV4 465 aaPredicted RBP11.37□□□□□ -0.59
COPB1-208ENST00000532088 C10orf67Q8IYJ2 551 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 LSMEM1Q8N8F7 131 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 TEX19Q8NA77 164 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 GATSQ8NAP1 163 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 NR4A3Q92570 626 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 CNOT9Q92600 299 aaKnown RBP11.37□□□□□ -0.59
COPB1-208ENST00000532088 C1GALT1C1Q96EU7 318 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 TTTY12Q9BZ98 90 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 OR2B2Q9GZK3 357 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 ZNF71Q9NQZ8 489 aaPredicted RBP11.37□□□□□ -0.59
COPB1-208ENST00000532088 RLIMQ9NVW2 624 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 CARD8Q9Y2G2 431 aa11.37□□□□□ -0.59
COPB1-208ENST00000532088 MAP1BP46821 2468 aaKnown RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 PINLYPA6NC86 204 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 ERICH4A6NGS2 130 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 FAM47E-STBD1D6RA91 191 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 GNB5O14775 395 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 BCAS1O75363 584 aaPredicted RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 PRKD3O94806 890 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 HPNP05981 417 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 HOXB4P17483 251 aaPredicted RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 EIF1P41567 113 aaKnown RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 ACAA2P42765 397 aaKnown RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 ZNF136P52737 540 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 RGS8P57771 180 aaPredicted RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 ACTR3P61158 418 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 PLEKHN1Q494U1 663 aaPredicted RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 GLIPR1L2Q4G1C9 344 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 C20orf204Q6ZNR8 217 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 FKBP9P1Q75LS8 142 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 HMGN2P46Q86SG4 172 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 FAM109AQ8N4B1 249 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 GPR119Q8TDV5 335 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 TMEM234Q8WY98 164 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 ST8SIA1Q92185 356 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 ZBTB8AQ96BR9 441 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 DUS3LQ96G46 650 aaKnown RBP11.36□□□□□ -0.59
COPB1-208ENST00000532088 TPD52L3Q96J77 140 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 ZNF559Q9BR84 538 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 TRIM2Q9C040 744 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 DSN1Q9H410 356 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 ZDHHC11Q9H8X9 412 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 C12orf10Q9HB07 376 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 ACKR4Q9NPB9 350 aa11.36□□□□□ -0.59
COPB1-208ENST00000532088 MED11Q9P086 117 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms