RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PRSS50Q9UI38 385 aa16.34■□□□□ 0.21
SSSCA1-206ENST00000531405 ING1Q9UK53 422 aaPredicted RBP16.34■□□□□ 0.21
SSSCA1-206ENST00000531405 TMED5Q9Y3A6 229 aa16.34■□□□□ 0.21
SSSCA1-206ENST00000531405 GPC6Q9Y625 555 aaPredicted RBP16.34■□□□□ 0.21
SSSCA1-206ENST00000531405 GTPBP1O00178 669 aaKnown RBP16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 PIP5K1BO14986 540 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 RAMP1O60894 148 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 KRT4P19013 534 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 CCT3P49368 545 aaKnown RBP16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 ITGADQ13349 1161 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 STK11Q15831 433 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 ETFDHQ16134 617 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 TMCO5AQ8N6Q1 288 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 PIWIL2Q8TC59 973 aaKnown RBP16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 PSD2Q9BQI7 771 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 ACTRT3Q9BYD9 372 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 POTEKPQ9BYX7 375 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 TRIM2Q9C040 744 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 GP6Q9HCN6 339 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 GPATCH2Q9NW75 528 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 GDF2Q9UK05 429 aaPredicted RBP16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 ACTL7BQ9Y614 415 aa16.33■□□□□ 0.2
SSSCA1-206ENST00000531405 H3BNH8 94 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 KIF2AO00139 706 aaPredicted RBP16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 TRIM13O60858 407 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 ADAM11O75078 769 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 PTNP21246 168 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 SLC7A1P30825 629 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 CCR4P51679 360 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 SUMO3P55854 103 aaPredicted RBP16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 SELENBP1Q13228 472 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 PTGR1Q14914 329 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 P2RY6Q15077 328 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 UGT3A2Q3SY77 523 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 SPDYE7PQ495Y7 208 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 TDRPQ86YL5 185 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 CNPY4Q8N129 248 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 AGR3Q8TD06 166 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 ADAMTS15Q8TE58 950 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 UBLCP1Q8WVY7 318 aaPredicted RBP16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 ZNF300Q96RE9 604 aaPredicted RBP16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 C1orf50Q9BV19 199 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 HOXD1Q9GZZ0 328 aa16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 FAF1Q9UNN5 650 aaPredicted RBP16.32■□□□□ 0.2
SSSCA1-206ENST00000531405 NPIPB9F8W1W9 429 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 SMAD9O15198 467 aaKnown RBP16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 PEX11AO75192 247 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 C6orf47O95873 294 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 CD8AP01732 235 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 TP53P04637 393 aaPredicted RBP16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 OR3A2P47893 321 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 ATP12AP54707 1039 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 C21orf58P58505 322 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 QPRTQ15274 297 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 Q6ZT83 130 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 SLC43A2Q8N370 569 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 OR56A1Q8NGH5 318 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 OR5D16Q8NGK9 328 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 OR5AK3PQ8NH89 298 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 OR5P2Q8WZ92 322 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 MRGPRX4Q96LA9 322 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 TRMOQ9BU70 441 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 TRAF4Q9BUZ4 470 aaPredicted RBP16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 QRSL1Q9H0R6 528 aaKnown RBP16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 BCO1Q9HAY6 547 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 KLHL9Q9P2J3 617 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 DTNAQ9Y4J8 743 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 TRAF6Q9Y4K3 522 aa16.31■□□□□ 0.2
SSSCA1-206ENST00000531405 ESPNB1AK53 854 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 TMEM114B3SHH9 223 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 SHISA9B4DS77 424 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 H6PDO95479 791 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 THBS1P07996 1170 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 RAC3P60763 192 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 RPS26P62854 115 aaKnown RBP16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 RASGEF1BQ0VAM2 473 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 PPA1Q15181 289 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 ARL13AQ5H913 290 aaPredicted RBP16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 SLC25A53Q5H9E4 307 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 PDZK1Q5T2W1 519 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 HMBOX1Q6NT76 420 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 DNM1P46Q6ZS02 220 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 OLIG3Q7RTU3 272 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 KRTCAP2Q8N6L1 136 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 OR5W2Q8NH69 310 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 OR2W6PQ8NHA6 318 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 PSMA8Q8TAA3 256 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 C3orf30Q96M34 536 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 OR5B2Q96R09 309 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 OR7D2Q96RA2 312 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 MECRQ9BV79 373 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 YAE1D1Q9NRH1 226 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 CISD1Q9NZ45 108 aaKnown RBP16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 NPAP1Q9NZP6 1156 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 MID2Q9UJV3 735 aa16.3■□□□□ 0.2
SSSCA1-206ENST00000531405 CENPVL1A0A0U1RR11 272 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 ZNF264O43296 627 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 CD5LO43866 347 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 CYTIPO60759 359 aa16.29■□□□□ 0.2
SSSCA1-206ENST00000531405 FGF4P08620 206 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 294.2 ms