RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 YES1P07947 543 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 SOD3P08294 240 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 DANCRP0C864 163 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 ENPP1P22413 925 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 IL32P24001 234 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
VPS28-214ENST00000531032 RAC3P60763 192 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 KRTAP1-1Q07627 177 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 TNK1Q13470 666 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 TP53BP2Q13625 1128 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 P2RY6Q15077 328 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 TAB1Q15750 504 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 ETFDHQ16134 617 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 NDUFAF6Q330K2 333 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 LSM12Q3MHD2 195 aaKnown RBP10.08□□□□□ -0.8
VPS28-214ENST00000531032 ATP6AP1LQ52LC2 224 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 C6orf136Q5SQH8 315 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 OR5W2Q8NH69 310 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 HSD17B8Q92506 261 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 KISS1RQ969F8 398 aaPredicted RBP10.08□□□□□ -0.8
VPS28-214ENST00000531032 FBXW5Q969U6 566 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 MOAP1Q96BY2 351 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 C3orf30Q96M34 536 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 MDFIQ99750 246 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 C1orf50Q9BV19 199 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 POTEKPQ9BYX7 375 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 ESRP2Q9H6T0 727 aaKnown RBP10.08□□□□□ -0.8
VPS28-214ENST00000531032 NGBQ9NPG2 151 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 SLC17A7Q9P2U7 560 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 ING1Q9UK53 422 aaPredicted RBP10.08□□□□□ -0.8
VPS28-214ENST00000531032 DTNAQ9Y4J8 743 aa10.08□□□□□ -0.8
VPS28-214ENST00000531032 NUP214P35658 2090 aaPredicted RBP10.08□□□□□ -0.8
VPS28-214ENST00000531032 ZNF814B7Z6K7 855 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 GTPBP1O00178 669 aaKnown RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 RGS16O15492 202 aaPredicted RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 CLOCKO15516 846 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ZNF264O43296 627 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 EIF4E2O60573 245 aaKnown RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 DNAJA2O60884 412 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ADAP00813 363 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 CD3EP07766 207 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 THBS1P07996 1170 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 PRPS1L1P21108 318 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ARRB2P32121 409 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 SERPINB5P36952 375 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 C21orf58P58505 322 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ITGADQ13349 1161 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 CBFBQ13951 182 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 QPRTQ15274 297 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 CLEC12BQ2HXU8 276 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 SPDYE7PQ495Y7 208 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ZNF672Q499Z4 452 aaPredicted RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 IL23RQ5VWK5 629 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ALKBH2Q6NS38 261 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 DNAJC14Q6Y2X3 702 aaPredicted RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 Q6ZT83 130 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ATG4DQ86TL0 474 aaPredicted RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 RIMKLAQ8IXN7 391 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ZNF619Q8N2I2 560 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 KRTCAP2Q8N6L1 136 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 FNDC5Q8NAU1 212 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ATP6V1C2Q8NEY4 427 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 TOR1AIP2Q8NFQ8 470 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 PIWIL2Q8TC59 973 aaKnown RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 AGR3Q8TD06 166 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 TCP10LQ8TDR4 215 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 OR7D2Q96RA2 312 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 PRPF18Q99633 342 aaKnown RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 PSD2Q9BQI7 771 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 BHLHE41Q9C0J9 482 aaPredicted RBP10.07□□□□□ -0.8
VPS28-214ENST00000531032 NMUR2Q9GZQ4 415 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 CENPHQ9H3R5 247 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 KLHL9Q9P2J3 617 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 ADAM21Q9UKJ8 722 aa10.07□□□□□ -0.8
VPS28-214ENST00000531032 FBN3Q75N90 2809 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 IGHV3-15A0A0B4J1V0 119 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 A0A1W2PNR3 127 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 SMAD9O15198 467 aaKnown RBP10.06□□□□□ -0.8
VPS28-214ENST00000531032 CYTIPO60759 359 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 UBL4AP11441 157 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 SLC7A1P30825 629 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 OR3A2P47893 321 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 HBA1P69905 142 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 BSPH1Q075Z2 132 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 SKP2Q13309 424 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 VEZF1Q14119 521 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 ZNF141Q15928 474 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 PGGHGQ32M88 737 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 PDZK1Q5T2W1 519 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 C3orf33Q6P1S2 294 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 BHLHB9Q6PI77 547 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 ZCCHC23Q6ZST2 131 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 BHLHA15Q7RTS1 189 aaPredicted RBP10.06□□□□□ -0.8
VPS28-214ENST00000531032 MREGQ8N565 214 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 TMCO5AQ8N6Q1 288 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 ZNF614Q8N883 585 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 OR5D16Q8NGK9 328 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 OR5AK3PQ8NH89 298 aa10.06□□□□□ -0.8
VPS28-214ENST00000531032 SMAP2Q8WU79 429 aaPredicted RBP10.06□□□□□ -0.8
VPS28-214ENST00000531032 NEUROG1Q92886 237 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms