RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MAP4K2Q12851 820 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ILKQ13418 452 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ZNF273Q14593 569 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 MFSD12Q6NUT3 480 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 BMP8AQ7Z5Y6 402 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 OR52P1PQ8NH57 321 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 GPBAR1Q8TDU6 330 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 PRRC1Q96M27 445 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 MED18Q9BUE0 208 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 USP36Q9P275 1121 aaKnown RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 PILRAQ9UKJ1 303 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 DSPPQ9NZW4 1301 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 A0A1W2PRQ8 180 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 SGK494L7N484 410 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 CHP2O43745 196 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 TLX2O43763 284 aaPredicted RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 CDRT1O95170 752 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 SMIM10L1P0DMW3 83 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 CKMT1AP12532 417 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 RFX3P48380 749 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 HSF2Q03933 536 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 HNRNPA0Q13151 305 aaKnown RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 EXOSC2Q13868 293 aaKnown RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 FZD2Q14332 565 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 GINS1Q14691 196 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 GPR68Q15743 365 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 CCDC85BQ15834 202 aaPredicted RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 FLYWCH1Q4VC44 716 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 SLC34A3Q8N130 599 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 CSNK1A1LQ8N752 337 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 OR52H1Q8NGJ2 320 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ARSGQ96EG1 525 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 SMIM10Q96HG1 83 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 SLC6A18Q96N87 628 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 GFM1Q96RP9 751 aaKnown RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 KCNJ15Q99712 375 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 EGLN3Q9H6Z9 239 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 ZFP64Q9NPA5 681 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 IFT46Q9NQC8 304 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 CNIH4Q9P003 139 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 KLF2Q9Y5W3 355 aaPredicted RBP10.74□□□□□ -0.69
USP35-207ENST00000530546 CDH10Q9Y6N8 788 aa10.74□□□□□ -0.69
USP35-207ENST00000530546 NPIPA5A0A0B4J1W7 369 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 NPIPA7E9PJI5 369 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 FGF17O60258 216 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 NPIPA8P0DM63 369 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 CPMP14384 443 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 TRHRP34981 398 aaPredicted RBP10.73□□□□□ -0.69
USP35-207ENST00000530546 SOX3P41225 446 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 RGS8P57771 180 aaPredicted RBP10.73□□□□□ -0.69
USP35-207ENST00000530546 HHEXQ03014 270 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 SRSF5Q13243 272 aaKnown RBP10.73□□□□□ -0.69
USP35-207ENST00000530546 BTN1A1Q13410 526 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 DUSP5Q16690 384 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 KLHL22Q53GT1 634 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 BAHD1Q8TBE0 780 aaPredicted RBP10.73□□□□□ -0.69
USP35-207ENST00000530546 SGTBQ96EQ0 304 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 RADILQ96JH8 1075 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 MS4A4EQ96PG1 132 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 FUZQ9BT04 418 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 MND1Q9BWT6 205 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 IL21RQ9HBE5 538 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 SEMA4GQ9NTN9 838 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 POT1Q9NUX5 634 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 KIF25Q9UIL4 384 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 GMEB2Q9UKD1 530 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 A0A087WUU8 490 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 A0A0J9YY10 115 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 CENPVL1A0A0U1RR11 272 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 ZNF10P21506 573 aaPredicted RBP10.73□□□□□ -0.69
USP35-207ENST00000530546 MAP2K6P52564 334 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 UBE2IP63279 158 aaKnown RBP10.73□□□□□ -0.69
USP35-207ENST00000530546 EXOSC7Q15024 291 aaKnown RBP10.73□□□□□ -0.69
USP35-207ENST00000530546 SPHARQ15513 63 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 CEBPEQ15744 281 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 MEDAGQ5VYS4 303 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 ARMC6Q6NXE6 501 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 ZNF730Q6ZMV8 503 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 RRM2BQ7LG56 351 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 PRICKLE2Q7Z3G6 844 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 GLCCI1Q86VQ1 547 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 TIGD4Q8IY51 512 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 MORN4Q8NDC4 146 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 PHF21AQ96BD5 680 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 TMEM43Q9BTV4 400 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 SHARPINQ9H0F6 387 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 MED28Q9H204 178 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 PPP1R3EQ9H7J1 279 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 FAM60AQ9NP50 221 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 CA14Q9ULX7 337 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 LIPT1Q9Y234 373 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 WDR45Q9Y484 360 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 CHST2Q9Y4C5 530 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 SLC22A7Q9Y694 548 aa10.73□□□□□ -0.69
USP35-207ENST00000530546 SPTY2D1-AS1A0A0U1RR47 76 aa10.72□□□□□ -0.69
USP35-207ENST00000530546 CASC3O15234 703 aaKnown RBP10.72□□□□□ -0.69
USP35-207ENST00000530546 HRO43593 1189 aa10.72□□□□□ -0.69
USP35-207ENST00000530546 PLOD3O60568 738 aa10.72□□□□□ -0.69
USP35-207ENST00000530546 APOL3O95236 402 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms