RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	SNTG1	Q9NSN8	517 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540		A0A1W2PNU3	283 aa	Predicted RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540		A0A1W2PRB8	838 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	CCDC182	A6NF36	153 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	GLOD5	A6NK44	160 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	VSTM2B	A6NLU5	285 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	FAAH	O00519	579 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	PGRMC2	O15173	223 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	B4GALT2	O60909	372 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	RAB40AL	P0C0E4	278 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZGLP1	P0C6A0	271 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	PRKCA	P17252	672 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	CHI3L1	P36222	383 aa	Predicted RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	MANF	P55145	182 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	PCBP4	P57723	403 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	ALDH6A1	Q02252	535 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	C1D	Q13901	141 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	RTP5	Q14D33	572 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	MINDY4	Q4G0A6	757 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC25A30	Q5SVS4	291 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC35F1	Q5T1Q4	408 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	MRPL14	Q6P1L8	145 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	PHC2	Q8IXK0	858 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	TCTE3	Q8IZS6	198 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC34A3	Q8N130	599 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	DMRTB1	Q96MA1	342 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	SPRY4	Q9C004	299 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	A4GALT	Q9NPC4	353 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	LANCL2	Q9NS86	450 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	SEMA3G	Q9NS98	782 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	CLEC2D	Q9UHP7	191 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	TMCC3	Q9ULS5	477 aa		13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	DIMT1	Q9UNQ2	313 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-231	ENST00000529540	TRBV4-1	A0A0J9YWV2	114 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	CDRT15L2	A8MXV6	281 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540		B4DXG7	233 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	C21orf140	B9A014	251 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	FFAR1	O14842	300 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	DNAJB6	O75190	326 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	CYP7B1	O75881	506 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	ATP1B1	P05026	303 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	CSF3	P09919	207 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC35E2	P0CK97	266 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	CPM	P14384	443 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	UQCRC2	P22695	453 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	GALNS	P34059	522 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	XK	P51811	444 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	GNG2	P59768	71 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	DSTN	P60981	165 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	IGLV3-21	P80748	117 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	GANAB	Q14697	944 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	TIGD3	Q6B0B8	471 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	REEP3	Q6NUK4	255 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	BHLHB9	Q6PI77	547 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	PLPP5	Q8NEB5	264 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	OR8J1	Q8NGP2	316 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	METTL21A	Q8WXB1	218 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	PMEPA1	Q969W9	287 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	MOAP1	Q96BY2	351 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	CNRIP1	Q96F85	164 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	RBM18	Q96H35	190 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZNF578	Q96N58	590 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	TSSK6	Q9BXA6	273 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	GPR87	Q9BY21	358 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	ISYNA1	Q9NPH2	558 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC22A11	Q9NSA0	550 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	DNAJC27	Q9NZQ0	273 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	CTSF	Q9UBX1	484 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	NOTO	A8MTQ0	251 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	FAM227A	F5H4B4	570 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	FGF17	O60258	216 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	PRKRA	O75569	313 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	IGHE	P01854	428 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	HLA-DQB1	P01920	261 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	CPE	P16870	476 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	MYL9	P24844	172 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	POU1F1	P28069	291 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	NCBP2	P52298	156 aa	Known RBP eCLIP	13.47	□□□□□ -0.25	3e-6	■■□□□ 12.6
NR1H3-231	ENST00000529540	DUSP7	Q16829	419 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	FAM131A	Q6UXB0	335 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	MMP21	Q8N119	569 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	NACC2	Q96BF6	587 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZNF681	Q96N22	645 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	FRMD6	Q96NE9	622 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	PTCHD1	Q96NR3	888 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	AMDHD1	Q96NU7	426 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	IL4I1	Q96RQ9	567 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	FUZ	Q9BT04	418 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	GON7	Q9BXV9	100 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	RBCK1	Q9BYM8	510 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	POLR2J2	Q9GZM3	115 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	RNF121	Q9H920	327 aa		13.47	□□□□□ -0.25
NR1H3-231	ENST00000529540	ABCB9	Q9NP78	766 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms