RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CARD8Q9Y2G2 431 aa16.63■□□□□ 0.25
SSRP1-204ENST00000529002 TGP01266 2768 aa16.63■□□□□ 0.25
SSRP1-204ENST00000529002 FAM187AA6NFU0 413 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 GJE1A6NN92 205 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 ATP6V1G2-DDX39BF2Z307 99 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 SCDO00767 359 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 RGS9O75916 674 aaPredicted RBP16.62■□□□□ 0.25
SSRP1-204ENST00000529002 H6PDO95479 791 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 ZNF23P17027 643 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 SLC7A1P30825 629 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 APOBEC3AP31941 199 aaPredicted RBP16.62■□□□□ 0.25
SSRP1-204ENST00000529002 NTF4P34130 210 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 RAC3P60763 192 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 SLC25A3Q00325 362 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 GALNT5Q7Z7M9 940 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 NUP43Q8NFH3 380 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 ZNF382Q96SR6 550 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 MRPL57Q9BQC6 102 aaKnown RBP16.62■□□□□ 0.25
SSRP1-204ENST00000529002 TRMOQ9BU70 441 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 SHCBP1LQ9BZQ2 653 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 OCEL1Q9H607 264 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 MYNNQ9NPC7 610 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 TMEFF2Q9UIK5 374 aaPredicted RBP16.62■□□□□ 0.25
SSRP1-204ENST00000529002 ICAM5Q9UMF0 924 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 NFU1Q9UMS0 254 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 SAR1BQ9Y6B6 198 aa16.62■□□□□ 0.25
SSRP1-204ENST00000529002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
SSRP1-204ENST00000529002 TTC36A6NLP5 189 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 SLU7O95391 586 aaKnown RBP16.61■□□□□ 0.25
SSRP1-204ENST00000529002 PRKCAP17252 672 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 GPC1P35052 558 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 PAFAH1B1P43034 410 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 FOXA1P55317 472 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 SWI5Q1ZZU3 235 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 ZNF385BQ569K4 471 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 C9orf135Q5VTT2 229 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 FBXW9Q5XUX1 488 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 MISPQ8IVT2 679 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 CDRT4Q8N9R6 151 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 WDR31Q8NA23 367 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 OR6Y1Q8NGX8 325 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 RFWD2Q8NHY2 731 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 GPR119Q8TDV5 335 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 DNAJA3Q96EY1 480 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 MRGPRX4Q96LA9 322 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 TMEM237Q96Q45 408 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 MRPL46Q9H2W6 279 aaKnown RBP16.61■□□□□ 0.25
SSRP1-204ENST00000529002 SIRT5Q9NXA8 310 aa16.61■□□□□ 0.25
SSRP1-204ENST00000529002 A0A1W2PQD3 144 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 ZNF724A8MTY0 619 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 NDUFS8O00217 210 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 EFNA1P20827 205 aaPredicted RBP16.6■□□□□ 0.25
SSRP1-204ENST00000529002 PHC1P78364 1004 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 C2orf54Q08AI8 447 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 GABRA6Q16445 453 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 TSNAXIP1Q2TAA8 658 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 ZNF678Q5SXM1 525 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 LRIG3Q6UXM1 1119 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 RINLQ6ZS11 566 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 COX18Q8N8Q8 333 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 OR5B2Q96R09 309 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 VRK1Q99986 396 aaPredicted RBP16.6■□□□□ 0.25
SSRP1-204ENST00000529002 BHLHE41Q9C0J9 482 aaPredicted RBP16.6■□□□□ 0.25
SSRP1-204ENST00000529002 QRSL1Q9H0R6 528 aaKnown RBP16.6■□□□□ 0.25
SSRP1-204ENST00000529002 GPC6Q9Y625 555 aaPredicted RBP16.6■□□□□ 0.25
SSRP1-204ENST00000529002 FKBP7Q9Y680 259 aa16.6■□□□□ 0.25
SSRP1-204ENST00000529002 LOC390937A0A1W2PQ73 354 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 ITGA5P08648 1049 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 BMP4P12644 408 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 P2RX1P51575 399 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 SELENBP1Q13228 472 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 MLC1Q15049 377 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 VPS26BQ4G0F5 336 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSRP1-204ENST00000529002 SSX8Q7RTT4 187 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 C3orf56Q8N813 242 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 SEMA6DQ8NFY4 1073 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 OR52E4Q8NGH9 312 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 HHATLQ9HCP6 504 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 MOKQ9UQ07 419 aa16.59■□□□□ 0.25
SSRP1-204ENST00000529002 KIF2AO00139 706 aaPredicted RBP16.58■□□□□ 0.24
SSRP1-204ENST00000529002 PDPK1O15530 556 aa16.58■□□□□ 0.24
SSRP1-204ENST00000529002 GSTM5P46439 218 aa16.58■□□□□ 0.24
SSRP1-204ENST00000529002 ACTG1P63261 375 aa16.58■□□□□ 0.24
SSRP1-204ENST00000529002 JADE3Q92613 823 aa16.58■□□□□ 0.24
SSRP1-204ENST00000529002 CDS1Q92903 461 aa16.58■□□□□ 0.24
SSRP1-204ENST00000529002 MUS81Q96NY9 551 aa16.58■□□□□ 0.24
SSRP1-204ENST00000529002 FKRPQ9H9S5 495 aa16.58■□□□□ 0.24
SSRP1-204ENST00000529002 ZSCAN12O43309 604 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 ALOX5P09917 674 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 GNG11P61952 73 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 POU6F2P78424 691 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-204ENST00000529002 QPRTQ15274 297 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 EXOSC6Q5RKV6 272 aaKnown RBP16.57■□□□□ 0.24
SSRP1-204ENST00000529002 CEP70Q8NHQ1 597 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 SGMS2Q8NHU3 365 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 APH1AQ96BI3 265 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 CHMP6Q96FZ7 201 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 MS4A4EQ96PG1 132 aa16.57■□□□□ 0.24
SSRP1-204ENST00000529002 NAPGQ99747 312 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms