RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PRAMEF20Q5VT98 475 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 TCEAL6Q6IPX3 200 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 SHFQ7M4L6 423 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 IGFN1Q86VF2 1251 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 HMGCLL1Q8TB92 370 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 LGALS12Q96DT0 336 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 PRDM7Q9NQW5 492 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 C2orf42Q9NWW7 574 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 PCDHGB2Q9Y5G2 931 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 KCNE1BA0A087WTH5 132 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 A0A0A6YYD5 115 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 A0A1W2PQ72 361 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 TACR3P29371 465 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 CCL7P80098 99 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 ZNF791Q3KP31 576 aaPredicted RBP13.99□□□□□ -0.17
USP47-207ENST00000527733 GPR139Q6DWJ6 353 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 TUBA3EQ6PEY2 450 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 SLC35F3Q8IY50 421 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 PAPD5Q8NDF8 572 aaKnown RBP13.99□□□□□ -0.17
USP47-207ENST00000527733 SLC35A4Q96G79 324 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 PITX2Q99697 317 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 UTP23Q9BRU9 249 aaKnown RBP13.99□□□□□ -0.17
USP47-207ENST00000527733 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
USP47-207ENST00000527733 A0A087WV62 115 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 SLC35F4A4IF30 521 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 TMEM221A6NGB7 291 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 M0R296 226 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 GASTP01350 101 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 HCKP08631 526 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 CHMP24386 653 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 RPS19BP1Q86WX3 136 aaKnown RBP13.99□□□□□ -0.17
USP47-207ENST00000527733 ESX1Q8N693 406 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 LRRC17Q8N6Y2 441 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 SDR9C7Q8NEX9 313 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 SLC2A12Q8TD20 617 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 C15orf40Q8WUR7 153 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 ZMYND19Q96E35 227 aaPredicted RBP13.99□□□□□ -0.17
USP47-207ENST00000527733 BARD1Q99728 777 aaKnown RBP13.99□□□□□ -0.17
USP47-207ENST00000527733 IKZF5Q9H5V7 419 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 ACAD8Q9UKU7 415 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 SLC6A5Q9Y345 797 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 IGHV1OR21-1A0A087WYE8 117 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 METTL21EPA6NDL7 271 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 CLPXO76031 633 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 NID1P14543 1247 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 ZNF182P17025 639 aaPredicted RBP13.98□□□□□ -0.17
USP47-207ENST00000527733 BCKDHBP21953 392 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 EIF2B2P49770 351 aaKnown RBP13.98□□□□□ -0.17
USP47-207ENST00000527733 KIAA0040Q15053 153 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 HSD17B12Q53GQ0 312 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 PLAG1Q6DJT9 500 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 C5orf46Q6UWT4 87 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 CEACAM19Q7Z692 300 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 ATP13A2Q9NQ11 1180 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 C7orf72A4D263 438 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 M0R129 80 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 CSTBP04080 98 aaKnown RBP13.98□□□□□ -0.17
USP47-207ENST00000527733 MRPL49Q13405 166 aaKnown RBP13.98□□□□□ -0.17
USP47-207ENST00000527733 ARHGAP11BQ3KRB8 267 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 ZNF613Q6PF04 617 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 LRRC69Q6ZNQ3 347 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 MBOAT2Q6ZWT7 520 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 NLGN4YQ8NFZ3 816 aaPredicted RBP13.98□□□□□ -0.17
USP47-207ENST00000527733 AMBRA1Q9C0C7 1298 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 ANKRD19PQ9H560 264 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 LOXL2Q9Y4K0 774 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 EP400Q96L91 3159 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 CTSVO60911 334 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 CASP6P55212 293 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 ZNF691Q5VV52 312 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 HMBOX1Q6NT76 420 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 QSOX2Q6ZRP7 698 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 ZNF227Q86WZ6 799 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 TSLPQ969D9 159 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 NUDT22Q9BRQ3 303 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 IFT46Q9NQC8 304 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 MCTS1Q9ULC4 181 aaKnown RBP13.98□□□□□ -0.17
USP47-207ENST00000527733 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 CELA2BP08218 269 aaPredicted RBP13.98□□□□□ -0.17
USP47-207ENST00000527733 ITGA5P08648 1049 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 GSTT2BP0CG30 244 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 POU3F2P20265 443 aaPredicted RBP13.98□□□□□ -0.17
USP47-207ENST00000527733 PPICP45877 212 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 DAPP51397 102 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 AGERQ15109 404 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 GALNT15Q8N3T1 639 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 OR1J4Q8NGS1 313 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 OR8K3Q8NH51 312 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 KLHL15Q96M94 604 aa13.98□□□□□ -0.17
USP47-207ENST00000527733 SNPHO15079 494 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 TSC22D2O75157 780 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 POLR2IP36954 125 aaKnown RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 POLR2HP52434 150 aaKnown RBP13.97□□□□□ -0.17
USP47-207ENST00000527733 TSPAN5P62079 268 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 GLO1Q04760 184 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 ARFRP1Q13795 201 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 SLC22A10Q63ZE4 541 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 DTWD2Q8NBA8 298 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 MSLNLQ96KJ4 702 aa13.97□□□□□ -0.17
USP47-207ENST00000527733 RBM24Q9BX46 236 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms