RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 A0A0B4J203 849 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 A0A1W2PPV9 198 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 C7orf66A4D0T2 115 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 FGF19O95750 216 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 AIFM1O95831 613 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 IFNA7P01567 189 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 MT-ND4P03905 459 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 HIST1H1TP22492 207 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 DGCR2P98153 550 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 HSF2Q03933 536 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 FZD5Q13467 585 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 LTB4RQ15722 352 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 COL28A1Q2UY09 1125 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 C6orf132Q5T0Z8 1188 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 FCRLBQ6BAA4 426 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 RPTNQ6XPR3 784 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 Q6ZS52 159 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 OR8D1Q8WZ84 308 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 GSDMCQ9BYG8 508 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 SLCO1C1Q9NYB5 712 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 GDE1Q9NZC3 331 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF780BQ9Y6R6 833 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 PLXNA2O75051 1894 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 TEX51A0A1B0GUA7 166 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 UNC119BA6NIH7 251 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 PRG2P13727 222 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 ENPP1P22413 925 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 THBS2P35442 1172 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 BDH1Q02338 343 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 SNTB2Q13425 540 aaKnown RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 SUZ12Q15022 739 aaKnown RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 ACSM3Q53FZ2 586 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 PRPF38BQ5VTL8 546 aaKnown RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 SYT9Q86SS6 491 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 LINC01555Q8NAE3 123 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 HSD17B8Q92506 261 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF764Q96H86 408 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 CD180Q99467 661 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 IFT27Q9BW83 186 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 HCAR1Q9BXC0 346 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 AICDAQ9GZX7 198 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 ANKRD19PQ9H560 264 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 MRPL15Q9P015 296 aaKnown RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 GPR179Q6PRD1 2367 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 A0A1W2PRG6 482 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 PAK4O96013 591 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 THY1P04216 161 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 PEPDP12955 493 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 HOXB3P14651 431 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 SNRPBP14678 240 aaKnown RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 RAB3BP20337 219 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 CERS1P27544 350 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 PYCR1P32322 319 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 VSX2P58304 361 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 RPL6Q02878 288 aaKnown RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 PRDX1Q06830 199 aaKnown RBP11.61□□□□□ -0.55
CAPN1-208ENST00000527323 AGERQ15109 404 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 GPR68Q15743 365 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 SLC36A2Q495M3 483 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 NIPAL3Q6P499 406 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 ESPNLQ6ZVH7 1005 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF765Q7L2R6 523 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 CEP76Q8TAP6 659 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 FANK1Q8TC84 345 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 GIMAP1Q8WWP7 306 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 ELP4Q96EB1 424 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 SLC35A4Q96G79 324 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 C4orf36Q96KX1 117 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 LGR4Q9BXB1 951 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 C1QTNF2Q9BXJ5 285 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 BRD7Q9NPI1 651 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 NUP50Q9UKX7 468 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 CA14Q9ULX7 337 aa11.61□□□□□ -0.55
CAPN1-208ENST00000527323 FAM86C2PA6NEL3 165 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PRR23D1E9PI22 279 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PRR23D2P0DMB1 279 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 IL9P15248 144 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 TEAD1P28347 426 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 BCL6P41182 706 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 EXOSC2Q13868 293 aaKnown RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 GALEQ14376 348 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 LGALSLQ3ZCW2 172 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 TMEM35AQ53FP2 167 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PXDC1Q5TGL8 231 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PRSS45Q7RTY3 260 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 KIAA0907Q7Z7F0 614 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 TPRA1Q86W33 373 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 IZUMO1Q8IYV9 350 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 SLC16A11Q8NCK7 471 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 SMRP1Q8NCR6 262 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF671Q8TAW3 534 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 ADAMTS14Q8WXS8 1223 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 MOAP1Q96BY2 351 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 NXPE2Q96DL1 559 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 ENKD1Q9H0I2 346 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 UBQLN2Q9UHD9 624 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 STON1Q9Y6Q2 735 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PIAS3Q9Y6X2 628 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 GPR171O14626 319 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 OR5F1O95221 314 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms