RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 EFNA1P20827 205 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 PTNP21246 168 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 ATP6V1C1P21283 382 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 SLC7A1P30825 629 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 NUDT6P53370 316 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 DSCR9P59020 149 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 DNAJB13P59910 316 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 RASGEF1BQ0VAM2 473 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 LASP1Q14847 261 aaKnown RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 MLC1Q15049 377 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 TMEM249Q2WGJ8 235 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 TRMT10CQ7L0Y3 403 aaKnown RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 CNPY4Q8N129 248 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 CLHC1Q8NHS4 586 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF775Q96BV0 537 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 MTERF3Q96E29 417 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 RADILQ96JH8 1075 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 TNFRSF13CQ96RJ3 184 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 SIRT3Q9NTG7 399 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 ZCCHC3Q9NUD5 404 aaKnown RBP14.24□□□□□ -0.13
PTPRU-210ENST00000527027 PTGDR2Q9Y5Y4 395 aa14.24□□□□□ -0.13
PTPRU-210ENST00000527027 GOLGA8QA0A0J9YX86 632 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 A0A1W2PNR3 127 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 GOLGA8OA6NCC3 632 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 GOLGA8NF8WBI6 632 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 RIPK2O43353 540 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 CYTIPO60759 359 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 GLRA3O75311 464 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 PGM3O95394 542 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 PROCP04070 461 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 GGT1P19440 569 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 IGHV1-2P23083 117 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 EDNRAP25101 427 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 RNF144AP50876 292 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 IRX1P78414 480 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 LOXL1Q08397 574 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 SELENBP1Q13228 472 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 RFTN2Q52LD8 501 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 ARL13AQ5H913 290 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 SLC25A53Q5H9E4 307 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 CLEC2AQ6UVW9 174 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 R3HCC1LQ7Z5L2 792 aaKnown RBP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 OR2T11Q8NH01 316 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 OR2W6PQ8NHA6 318 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 MZB1Q8WU39 189 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF524Q96C55 264 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 KCNK17Q96T54 332 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 CACNG6Q9BXT2 260 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 NPAP1Q9NZP6 1156 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 PSMC3IPQ9P2W1 217 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-210ENST00000527027 TMED5Q9Y3A6 229 aa14.23□□□□□ -0.13
PTPRU-210ENST00000527027 NPIPA5A0A0B4J1W7 369 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 OR5H1A6NKK0 313 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ELOA3DA6NLF2 546 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF724A8MTY0 619 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 E7EQL1 145 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 NPIPA7E9PJI5 369 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 SMAD9O15198 467 aaKnown RBP14.22□□□□□ -0.13
PTPRU-210ENST00000527027 NPIPA8P0DM63 369 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 NEFHP12036 1026 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 DDX5P17844 614 aaKnown RBP14.22□□□□□ -0.13
PTPRU-210ENST00000527027 COX5AP20674 150 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 TTKP33981 857 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ASMTP46597 345 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ATP12AP54707 1039 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 VLDLRP98155 873 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ELOA3BQ3SY89 546 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 CCDC153Q494R4 210 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 DCST2Q5T1A1 773 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 C11orf71Q6IPW1 123 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 CDC73Q6P1J9 531 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 TMEM108Q6UXF1 575 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 RNF165Q6ZSG1 346 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 GALNT5Q7Z7M9 940 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF100Q8IYN0 542 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF433Q8N7K0 673 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ELOA3Q8NG57 546 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 OR5W2Q8NH69 310 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ZNF75CPQ92670 426 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ARL8AQ96BM9 186 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 DHRS9Q9BPW9 319 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 BEX2Q9BXY8 128 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 ANKZF1Q9H8Y5 726 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 CBLN4Q9NTU7 201 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 OXSMQ9NWU1 459 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 TMEM160Q9NX00 188 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 TBK1Q9UHD2 729 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 MGAT4BQ9UQ53 548 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 DTNAQ9Y4J8 743 aa14.22□□□□□ -0.13
PTPRU-210ENST00000527027 A0A1W2PPM1 405 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 NPIPB9F8W1W9 429 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 ETV2O00321 342 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-210ENST00000527027 AZIN1O14977 448 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 EIF4E2O60573 245 aaKnown RBP14.21□□□□□ -0.13
PTPRU-210ENST00000527027 PLIN3O60664 434 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 CPA3P15088 417 aa14.21□□□□□ -0.13
PTPRU-210ENST00000527027 CCT3P49368 545 aaKnown RBP14.21□□□□□ -0.13
PTPRU-210ENST00000527027 RPL38P63173 70 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms