RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PPP3R1P63098 170 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 ZNF517Q6ZMY9 492 aaPredicted RBP16.23■□□□□ 0.19
USH1C-205ENST00000527020 BMP8AQ7Z5Y6 402 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 GRAMD2AQ8IUY3 354 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 AVL9Q8NBF6 648 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 PPP1R3EQ9H7J1 279 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 TMEM27Q9HBJ8 222 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 C14orf105Q9NVL8 296 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 BABAM2Q9NXR7 383 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 DNAJB12Q9NXW2 375 aaKnown RBP16.23■□□□□ 0.19
USH1C-205ENST00000527020 DTX4Q9Y2E6 619 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 GTPBP1O00178 669 aaKnown RBP16.23■□□□□ 0.19
USH1C-205ENST00000527020 OR10H2O60403 315 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 IGLV3-19P01714 112 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 SAGP10523 405 aaPredicted RBP16.23■□□□□ 0.19
USH1C-205ENST00000527020 GALP22466 123 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 CCR5P51681 352 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.23■□□□□ 0.19
USH1C-205ENST00000527020 KLHL12Q53G59 568 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 CNIH2Q6PI25 160 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 NR2C2APQ86WQ0 139 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 SLC44A3Q8N4M1 653 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 SMRP1Q8NCR6 262 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 OR6F1Q8NGZ6 308 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 OR51A7Q8NH64 312 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 EFHD2Q96C19 240 aaPredicted RBP16.23■□□□□ 0.19
USH1C-205ENST00000527020 TOE1Q96GM8 510 aaKnown RBP16.23■□□□□ 0.19
USH1C-205ENST00000527020 ART5Q96L15 291 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 TEAD3Q99594 435 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 C11orf54Q9H0W9 315 aaPredicted RBP16.23■□□□□ 0.19
USH1C-205ENST00000527020 FBXL21Q9UKT6 434 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 CYP8B1Q9UNU6 501 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 HEATR5AQ86XA9 2040 aa16.23■□□□□ 0.19
USH1C-205ENST00000527020 THADAQ6YHU6 1953 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 A0A0A6YYC8 382 aaPredicted RBP16.22■□□□□ 0.19
USH1C-205ENST00000527020 I3L1I5 382 aaPredicted RBP16.22■□□□□ 0.19
USH1C-205ENST00000527020 PLA2G10O15496 165 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 COQ9O75208 318 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 CLUP10909 449 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 APEX1P27695 318 aaKnown RBP16.22■□□□□ 0.19
USH1C-205ENST00000527020 FAM53BQ14153 422 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 GALEQ14376 348 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 PRTGQ2VWP7 1150 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 PYDC2Q56P42 97 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 CDK20Q8IZL9 346 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 ZNF614Q8N883 585 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 C19orf47Q8N9M1 422 aaKnown RBP16.22■□□□□ 0.19
USH1C-205ENST00000527020 FBXL4Q9UKA2 621 aa16.22■□□□□ 0.19
USH1C-205ENST00000527020 NDRG2Q9UN36 371 aaKnown RBP16.22■□□□□ 0.19
USH1C-205ENST00000527020 PRUNE2Q8WUY3 3088 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.21■□□□□ 0.19
USH1C-205ENST00000527020 FAM86C2PA6NEL3 165 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 PRR23D1E9PI22 279 aaPredicted RBP16.21■□□□□ 0.19
USH1C-205ENST00000527020 FOXS1O43638 330 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 CCNKO75909 580 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 PRR23D2P0DMB1 279 aaPredicted RBP16.21■□□□□ 0.19
USH1C-205ENST00000527020 NR4A2P43354 598 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 P2RY14Q15391 338 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 ZNF544Q6NX49 715 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 Q6ZS52 159 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 RAB43Q86YS6 212 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 ZDHHC1Q8WTX9 485 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 VSTM2LQ96N03 204 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 SLC22A4Q9H015 551 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 MMP28Q9H239 520 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 MCCC2Q9HCC0 563 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 WDR70Q9NW82 654 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 HCN3Q9P1Z3 774 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 ZMIZ1Q9ULJ6 1067 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 SLC35A3Q9Y2D2 325 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 CLDN16Q9Y5I7 305 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 USP34Q70CQ2 3546 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 GON4LQ3T8J9 2241 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 DAPL1A0PJW8 107 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 SYNDIG1LA6NDD5 238 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 C2CD4DB7Z1M9 353 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 E9PI62 339 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 HCN1O60741 890 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 RGS9O75916 674 aaPredicted RBP16.21■□□□□ 0.19
USH1C-205ENST00000527020 PPP1R3DO95685 299 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 GUSBP08236 651 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 CTSEP14091 401 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 CRMP1Q14194 572 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 NPSR1Q6W5P4 371 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 MCATQ8IVS2 390 aaKnown RBP16.21■□□□□ 0.19
USH1C-205ENST00000527020 OR10H4Q8NGA5 316 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 TNFRSF13CQ96RJ3 184 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 ORAI3Q9BRQ5 295 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 OR51V1Q9H2C8 321 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 PPIL3Q9H2H8 161 aaKnown RBP16.21■□□□□ 0.19
USH1C-205ENST00000527020 ADGRL4Q9HBW9 690 aa16.21■□□□□ 0.19
USH1C-205ENST00000527020 SLC9B1P1A6NJY1 282 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 SLC22A31A6NKX4 558 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 B4DGG1 531 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 NPIPB9F8W1W9 429 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 HRO43593 1189 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 MRPL3P09001 348 aaKnown RBP16.2■□□□□ 0.18
USH1C-205ENST00000527020 EVX1P49640 407 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 LINC00114Q6XXX2 140 aa16.2■□□□□ 0.18
USH1C-205ENST00000527020 CYB561A3Q8NBI2 242 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms