RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 SEMA4FO95754 770 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 ACVR1BP36896 505 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 INPP1P49441 399 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 SRP54P61011 504 aaKnown RBP11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 MTFR2Q6P444 385 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 CD300LDQ6UXZ3 194 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 TMEM64Q6YI46 380 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 RASSF6Q6ZTQ3 369 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 CXXC5Q7LFL8 322 aaKnown RBP11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 ZAR1Q86SH2 424 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 ASPGQ86U10 573 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 MFSD9Q8NBP5 474 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 ST8SIA2Q92186 375 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 ARHGDIGQ99819 225 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 C1QTNF7Q9BXJ2 289 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 TTYH1Q9H313 450 aaPredicted RBP11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 CACYBPQ9HB71 228 aaKnown RBP11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 KLHL1Q9NR64 748 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 CBLCQ9ULV8 474 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 TRAPPC4Q9Y296 219 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 RP1P56715 2156 aa11.11□□□□□ -0.63
CHMP1B-201ENST00000526991 ZGLP1P0C6A0 271 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 MYF5P13349 255 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 NOS3P29474 1203 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 LSSP48449 732 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 OR10A3P58181 314 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 TPBGQ13641 420 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 COL13A1Q5TAT6 717 aaPredicted RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 AADACL4Q5VUY2 407 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 ZNF620Q6ZNG0 422 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 OR2T33Q8NG76 320 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 OR4K14Q8NGD5 310 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 OR13C5Q8NGS8 318 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 PTCHD1Q96NR3 888 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 TMEM246Q9BRR3 403 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 IFT27Q9BW83 186 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 HDHD2Q9H0R4 259 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 OR52D1Q9H346 318 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 IL21RQ9HBE5 538 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 MCCC2Q9HCC0 563 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 MRPL39Q9NYK5 338 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 WSB2Q9NYS7 404 aaPredicted RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 MTCH2Q9Y6C9 303 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 GXYLT2A0PJZ3 443 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 TSPAN4O14817 238 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 PAICSP22234 425 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 HNRNPA2B1P22626 353 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 HTR2AP28223 471 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 GABRA5P31644 462 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 GPR85P60893 370 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 SHC2P98077 582 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 BNC1Q01954 994 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 RGS1Q08116 209 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 GXYLT1Q4G148 440 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 MRPL2Q5T653 305 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 XKRXQ6PP77 449 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 TMEM184AQ6ZMB5 413 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 NR2C2APQ86WQ0 139 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 TDHQ8IZJ6 230 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 ARL14Q8N4G2 192 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 KLHL36Q8N4N3 616 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 OSTF1Q92882 214 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 TIMM29Q9BSF4 260 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 FOXQ1Q9C009 403 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 GRIP1Q9Y3R0 1128 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 PCDH15Q96QU1 1955 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 TMEM129A0AVI4 362 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 PRSS47A8MTI9 375 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 SLC35G6P0C7Q6 338 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 SHC1P29353 583 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 SNRPD2P62316 118 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 NFATC4Q14934 902 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 UBXN2BQ14CS0 331 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 TMPRSS9Q7Z410 1059 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 SFXN5Q8TD22 340 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 RSC1A1Q92681 617 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 DNAJA3Q96EY1 480 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 MSLNLQ96KJ4 702 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 C10orf90Q96M02 699 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 SDF2Q99470 211 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 FGF20Q9NP95 211 aaPredicted RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 KCNE5Q9UJ90 142 aa11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 RPH3AQ9Y2J0 694 aaPredicted RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 EXOSC1Q9Y3B2 195 aaKnown RBP11.1□□□□□ -0.63
CHMP1B-201ENST00000526991 OR6C70A6NIJ9 312 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 KDM4EB2RXH2 506 aaPredicted RBP11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 J3QLW9 94 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 ZNF19P17023 458 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 TEAD1P28347 426 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 ERV3-1Q14264 604 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 QPRTQ15274 297 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 ZNF425Q6IV72 752 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 PLET1Q6UQ28 207 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 CLDN22Q8N7P3 220 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 COX18Q8N8Q8 333 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 FANK1Q8TC84 345 aa11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 EFHD2Q96C19 240 aaPredicted RBP11.09□□□□□ -0.63
CHMP1B-201ENST00000526991 FRMD6Q96NE9 622 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms