RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 GRAMD2AQ8IUY3 354 aa19.64■□□□□ 0.74
VPS28-205ENST00000526204 SLC7A5P1Q8MH63 180 aa19.64■□□□□ 0.74
VPS28-205ENST00000526204 MRPL38Q96DV4 380 aaKnown RBP19.64■□□□□ 0.74
VPS28-205ENST00000526204 ART5Q96L15 291 aa19.64■□□□□ 0.74
VPS28-205ENST00000526204 TBX5Q99593 518 aa19.64■□□□□ 0.74
VPS28-205ENST00000526204 KCNJ15Q99712 375 aa19.64■□□□□ 0.74
VPS28-205ENST00000526204 MEPEQ9NQ76 525 aaPredicted RBP19.64■□□□□ 0.74
VPS28-205ENST00000526204 A0A0B4J2E0 115 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 A0A1B0GX12 115 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 GXYLT2A0PJZ3 443 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 ZNF3P17036 446 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 INPP1P49441 399 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 TPMTP51580 245 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 MRPS21P82921 87 aaKnown RBP19.64■□□□□ 0.73
VPS28-205ENST00000526204 MADCAM1Q13477 382 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 SF3A2Q15428 464 aaKnown RBP19.64■□□□□ 0.73
VPS28-205ENST00000526204 Q6ZSR6 202 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 TPRA1Q86W33 373 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 UBE2J2Q8N2K1 259 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 GPBAR1Q8TDU6 330 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 ANKRD9Q96BM1 317 aaPredicted RBP19.64■□□□□ 0.73
VPS28-205ENST00000526204 MARCH7Q9H992 704 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 CD93Q9NPY3 652 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 B3GAT2Q9NPZ5 323 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 HAO2Q9NYQ3 351 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 HS3ST3A1Q9Y663 406 aa19.64■□□□□ 0.73
VPS28-205ENST00000526204 EPOPA6NHQ4 379 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 LYRM1O43325 122 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 REM1O75628 298 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 TNFP01375 233 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 HK1P19367 917 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 SLC16A1P53985 500 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 RAB38P57729 211 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 POU4F2Q12837 409 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 RTL4Q6ZR62 310 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 LRRC28Q86X40 367 aaPredicted RBP19.63■□□□□ 0.73
VPS28-205ENST00000526204 CCDC3Q9BQI4 270 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 OR51V1Q9H2C8 321 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 NUFIP1Q9UHK0 495 aaKnown RBP19.63■□□□□ 0.73
VPS28-205ENST00000526204 ATG2BQ96BY7 2078 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 KIR2DS5A0A0G2JLQ3 304 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 A0A0G2JNG1 304 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 OR5K4A6NMS3 321 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 A8MV72 311 aaPredicted RBP19.63■□□□□ 0.73
VPS28-205ENST00000526204 FAM47E-STBD1D6RA91 191 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 KIR2DS3K7RE56 304 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 TRIM3O75382 744 aaPredicted RBP19.63■□□□□ 0.73
VPS28-205ENST00000526204 SBK2P0C263 348 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 PSKH1P11801 424 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 PEPDP12955 493 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 DRD1P21728 446 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 UBE2IP63279 158 aaKnown RBP19.63■□□□□ 0.73
VPS28-205ENST00000526204 ACTC1P68032 377 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 ACTA1P68133 377 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 PLAURQ03405 335 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 KIR2DS5Q14953 304 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 ZNHIT3Q15649 155 aaPredicted RBP19.63■□□□□ 0.73
VPS28-205ENST00000526204 ZNF362Q5T0B9 420 aaPredicted RBP19.63■□□□□ 0.73
VPS28-205ENST00000526204 IDNKQ5T6J7 187 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 OAFQ86UD1 273 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 OR52R1Q8NGF1 315 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 UBASH3BQ8TF42 649 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 CNOT9Q92600 299 aaKnown RBP19.63■□□□□ 0.73
VPS28-205ENST00000526204 TRIM2Q9C040 744 aa19.63■□□□□ 0.73
VPS28-205ENST00000526204 FAM240BA0A1B0GVZ2 78 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 OR10H2O60403 315 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 CBX7O95931 251 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 IFNGP01579 166 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 SLC2A5P22732 501 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 VSX2P58304 361 aaPredicted RBP19.62■□□□□ 0.73
VPS28-205ENST00000526204 OR5M3Q8NGP4 307 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 OR51A7Q8NH64 312 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 GRHL3Q8TE85 626 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 PATE1Q8WXA2 126 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 DMRTB1Q96MA1 342 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 ZNF426Q9BUY5 554 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 GSDMCQ9BYG8 508 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 CYSLTR2Q9NS75 346 aa19.62■□□□□ 0.73
VPS28-205ENST00000526204 TRAV27A0A087WT01 109 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 A0A0B4J293 547 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 A0A1B0GWA3 101 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 CHRNB1P11230 501 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 ELK1P19419 428 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 NOS3P29474 1203 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 SLC6A6P31641 620 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 TALDO1P37837 337 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 RABIFP47224 123 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 CDK10Q15131 360 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 SHHQ15465 462 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 ZSWIM7Q19AV6 140 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 ARL9Q6T311 187 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 TRILQ7L0X0 811 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 OOSP2Q86WS3 158 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 RNF31Q96EP0 1072 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 S1PR5Q9H228 398 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 ADGRL4Q9HBW9 690 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 EXTL2Q9UBQ6 330 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 TTC36A6NLP5 189 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 YES1P07947 543 aa19.61■□□□□ 0.73
VPS28-205ENST00000526204 FAM157BP0CG42 384 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms