RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	PAMR1	Q6UXH9	720 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	ATP6V1C2	Q8NEY4	427 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	RAB8B	Q92930	207 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	ROPN1L	Q96C74	230 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	TLCD1	Q96CP7	247 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	ARSG	Q96EG1	525 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	OR52E6	Q96RD3	313 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	KLHL4	Q9C0H6	718 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	LAT2	Q9GZY6	243 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	LIME1	Q9H400	295 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	PLSCR4	Q9NRQ2	329 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	SERINC1	Q9NRX5	453 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	KLHL28	Q9NXS3	571 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	CLEC4A	Q9UMR7	237 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	SLC35A3	Q9Y2D2	325 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	PLEKHA6	Q9Y2H5	1048 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	ANKRD17	O75179	2603 aa	Known RBP	11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	PCNX3	Q9H6A9	2034 aa		11.28	□□□□□ -0.6
RBBP4-215	ENST00000524393	CCDC154	A6NI56	674 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	OIP5	O43482	229 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	KIAA0513	O60268	411 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	HRG	P04196	525 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	IL6	P05231	212 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	PGR	P06401	933 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	GUSB	P08236	651 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	UBTFL6	P0CB48	400 aa	Predicted RBP	11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	IL11	P20809	199 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	PHC1	P78364	1004 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	TOMM34	Q15785	309 aa	Predicted RBP	11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZNF239	Q16600	458 aa	Known RBP	11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	GSTA3	Q16772	222 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZNF621	Q6ZSS3	439 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	BEND4	Q6ZU67	534 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZNF619	Q8N2I2	560 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	PIWIL2	Q8TC59	973 aa	Known RBP	11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZFP90	Q8TF47	636 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	ST8SIA1	Q92185	356 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	WFIKKN1	Q96NZ8	548 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	KLHDC3	Q9BQ90	382 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	TACO1	Q9BSH4	297 aa	Known RBP	11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	THUMPD3	Q9BV44	507 aa	Known RBP	11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	LIPT1	Q9Y234	373 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	GPR45	Q9Y5Y3	372 aa		11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	SPIN1	Q9Y657	262 aa	Predicted RBP	11.27	□□□□□ -0.61
RBBP4-215	ENST00000524393	RFXANK	O14593	260 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	KLF11	O14901	512 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	SLC22A3	O75751	556 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	ANP32D	O95626	131 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	KRT75	O95678	551 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	PPP3CB	P16298	524 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	AGTR1	P30556	359 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	PPP2R2A	P63151	447 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	SKP2	Q13309	424 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	GNA13	Q14344	377 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	TIGD2	Q4W5G0	525 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	PDCD4	Q53EL6	469 aa	Known RBP	11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	SLC25A53	Q5H9E4	307 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	AGBL2	Q5U5Z8	902 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	TYW3	Q6IPR3	259 aa	Known RBP	11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	RNF130	Q86XS8	419 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	SLC43A2	Q8N370	569 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	GOLGA6L1	Q8N7Z2	621 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZNF563	Q8TA94	476 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	RNF128	Q8TEB7	428 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	ROBO4	Q8WZ75	1007 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	TEX37	Q96LM6	180 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	ALPK1	Q96QP1	1244 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	C12orf49	Q9H741	205 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	RMND5A	Q9H871	391 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	GP6	Q9HCN6	339 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	KCNE5	Q9UJ90	142 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	OTOG	Q6ZRI0	2925 aa		11.26	□□□□□ -0.61
RBBP4-215	ENST00000524393	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393		C9JVG2	144 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	HMGN4	O00479	90 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	UBD	O15205	165 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	PRKD3	O94806	890 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	H6PD	O95479	791 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	NTN1	O95631	604 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	CRYGS	P22914	178 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	SHC1	P29353	583 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	MERTK	Q12866	999 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	FRRS1	Q6ZNA5	592 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	FCRLA	Q7L513	359 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	OLIG3	Q7RTU3	272 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZNF550	Q7Z398	422 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	ARFGAP2	Q8N6H7	521 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	ABHD3	Q8WU67	409 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZNF75CP	Q92670	426 aa	Predicted RBP	11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	MBD6	Q96DN6	1003 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	PIK3IP1	Q96FE7	263 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZC3HAV1L	Q96H79	300 aa	Known RBP	11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	MAEL	Q96JY0	434 aa	Known RBP	11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	TRNT1	Q96Q11	434 aa	Known RBP	11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	OR5B2	Q96R09	309 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms