RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 MAP3K8P41279 467 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 AGFG1P52594 562 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SLC16A1P53985 500 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 RRAS2P62070 204 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SHC2P98077 582 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 E2F1Q01094 437 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 PLAURQ03405 335 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 NFATC4Q14934 902 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 EXOSC7Q15024 291 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 TRAM1Q15629 374 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SNAP47Q5SQN1 464 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 FAM27D1Q5T7N8 215 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 FCRLBQ6BAA4 426 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 THOC7Q6I9Y2 204 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SFXN4Q6P4A7 337 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 ZCCHC12Q6PEW1 402 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SYCE2Q6PIF2 218 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 IL20RBQ6UXL0 311 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 VASH1Q7L8A9 365 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 PRSS41Q7RTY9 318 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 BMP8AQ7Z5Y6 402 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 GPALPP1Q8IXQ4 340 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 OR4M1Q8NGD0 313 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 ZFAND1Q8TCF1 268 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 CREB3L1Q96BA8 519 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 ARSGQ96EG1 525 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 HDHD2Q9H0R4 259 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 TMEM168Q9H0V1 697 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 RASD1Q9Y272 281 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SLC35A3Q9Y2D2 325 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 RANBP2P49792 3224 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 GXYLT2A0PJZ3 443 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 RFPL3O75679 317 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 GPR75O95800 540 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 PAHP00439 452 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 C1QBP02746 253 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 RBMS1P29558 406 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 TALDO1P37837 337 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 RFX3P48380 749 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF85Q03923 595 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SLC3A1Q07837 685 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 MGAT2Q10469 447 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 GPR176Q14439 515 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 PRICKLE4Q2TBC4 344 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 PARM1Q6UWI2 310 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 CEACAM19Q7Z692 300 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 OAFQ86UD1 273 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 TPRA1Q86W33 373 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 SAMD12Q8N8I0 201 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 OR51A7Q8NH64 312 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 OR10G6Q8NH81 332 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 ABHD4Q8TB40 342 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 FGF14Q92915 247 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 TRIM63Q969Q1 353 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 WDR92Q96MX6 357 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 MYADMQ96S97 322 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 THAP7Q9BT49 309 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 RPP25Q9BUL9 199 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 GON7Q9BXV9 100 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 NDEL1Q9GZM8 345 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 NIPAL2Q9H841 368 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 IL21RQ9HBE5 538 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 ADGRL4Q9HBW9 690 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 RPRD1BQ9NQG5 326 aaKnown RBP10.25□□□□□ -0.77
HDAC9-228ENST00000524023 MCUBQ9NWR8 336 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 ING3Q9NXR8 418 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 ACTR10Q9NZ32 417 aa10.25□□□□□ -0.77
HDAC9-228ENST00000524023 F5P12259 2224 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 A0A0G2JK05 382 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 A6NCN8 305 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 OR6C74A6NCV1 312 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 RIIAD1A6NNX1 92 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 H0YGG7 62 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 J3QLW9 94 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 BRINP1O60477 761 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 SC5DO75845 299 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 AK1P00568 194 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 CT62P0C5K7 136 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 TFPIP10646 304 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 CLUP10909 449 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF19P17023 458 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 NPR2P20594 1047 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 COL9A1P20849 921 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 SLC6A1P30531 599 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 GABRA3P34903 492 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 PITPNBP48739 271 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ATP12AP54707 1039 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 OR10A3P58181 314 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 OR12D2P58182 307 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 TAS2R43P59537 309 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ARF3P61204 181 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 POU6F2P78424 691 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 TNK1Q13470 666 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 CRMP1Q14194 572 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 CCDC85BQ15834 202 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 FAM109BQ6ICB4 259 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF613Q6PF04 617 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 PXKQ7Z7A4 578 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 PLCZ1Q86YW0 608 aa10.24□□□□□ -0.77
HDAC9-228ENST00000524023 DTX3Q8N9I9 347 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms