RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CDK6Q00534 326 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 SF3A3Q12874 501 aaKnown RBP eCLIP11.33□□□□□ -0.69e-12■■■■■ 32
VEGFA-225ENST00000523950 LARS2Q15031 903 aaKnown RBP11.33□□□□□ -0.6
VEGFA-225ENST00000523950 QPRTQ15274 297 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 RNF220Q5VTB9 566 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 EEF1A1P5Q5VTE0 462 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 NCCRP1Q6ZVX7 275 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-225ENST00000523950 GRAMD2AQ8IUY3 354 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 SLC30A8Q8IWU4 369 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 OR52P1PQ8NH57 321 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 RP9Q8TA86 221 aaKnown RBP11.33□□□□□ -0.6
VEGFA-225ENST00000523950 POC1BQ8TC44 478 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 CA5BP1Q8WTZ4 195 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 WNT2BQ93097 391 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 SLC35B4Q969S0 331 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 SDCCAG3Q96C92 435 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 ZG16BQ96DA0 208 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 RNF145Q96MT1 663 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 TRIB1Q96RU8 372 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 CCT8L2Q96SF2 557 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 TM9SF2Q99805 663 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 TUBA1CQ9BQE3 449 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 THUMPD3Q9BV44 507 aaKnown RBP11.33□□□□□ -0.6
VEGFA-225ENST00000523950 SPATA5L1Q9BVQ7 753 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 SPATA9Q9BWV2 254 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
VEGFA-225ENST00000523950 GID8Q9NWU2 228 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 ZNF232Q9UNY5 417 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 RNF6Q9Y252 685 aa11.33□□□□□ -0.6
VEGFA-225ENST00000523950 A0A0G2JNJ9 132 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 CLCA1A8K7I4 914 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 FAAHO00519 579 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 MRASO14807 208 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 CYP7B1O75881 506 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 PGM3O95394 542 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 CLDN1O95832 211 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 IL2RAP01589 272 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 NUDT7P0C024 238 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 SLC6A2P23975 617 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 CEACAM8P31997 349 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-225ENST00000523950 SRYQ05066 204 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 FOXF1Q12946 379 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 SELENBP1Q13228 472 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 NDUFAF6Q330K2 333 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 PDSS1Q5T2R2 415 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 MRPL2Q5T653 305 aaKnown RBP11.32□□□□□ -0.6
VEGFA-225ENST00000523950 REP15Q6BDI9 236 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 REEP3Q6NUK4 255 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 ESPNLQ6ZVH7 1005 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 SEM1Q6ZVN7 128 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 NET1Q7Z628 596 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-225ENST00000523950 SERPINA11Q86U17 422 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 SNX32Q86XE0 403 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 KRT73Q86Y46 540 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 HIPK4Q8NE63 616 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 OR8J3Q8NGG0 315 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 OR5M1Q8NGP8 315 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 OR10Q1Q8NGQ4 319 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 LILRB4Q8NHJ6 448 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 IKZF5Q9H5V7 419 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 CHST11Q9NPF2 352 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 ACER3Q9NUN7 267 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 DNAJB12Q9NXW2 375 aaKnown RBP11.32□□□□□ -0.6
VEGFA-225ENST00000523950 CLCF1Q9UBD9 225 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 ZNF629Q9UEG4 869 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-225ENST00000523950 Q9UFV3 132 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 ZNF443Q9Y2A4 671 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-225ENST00000523950 ZNF175Q9Y473 711 aa11.32□□□□□ -0.6
VEGFA-225ENST00000523950 DOPEY1Q5JWR5 2465 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 A1L4Q6 167 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 CDHR4A6H8M9 788 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 SEC14L5O43304 696 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 RCBTB2O95199 551 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 IL18BPO95998 194 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 PABPC4LP0CB38 370 aaKnown RBP11.31□□□□□ -0.6
VEGFA-225ENST00000523950 FCGR2AP12318 317 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 FKBP2P26885 142 aaKnown RBP11.31□□□□□ -0.6
VEGFA-225ENST00000523950 HTR3AP46098 478 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-225ENST00000523950 SCARB2Q14108 478 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 CYP51A1Q16850 503 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 SLC25A35Q3KQZ1 300 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 GKAP1Q5VSY0 366 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-225ENST00000523950 OR2A2Q6IF42 318 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 C3orf33Q6P1S2 294 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 ZNF550Q7Z398 422 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 GRINAQ7Z429 371 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 GGNQ86UU5 652 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 UBQLNLQ8IYU4 475 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 ANKS4BQ8N8V4 417 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 C11orf65Q8NCR3 313 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 BHLHE22Q8NFJ8 381 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-225ENST00000523950 FBXO27Q8NI29 283 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 NFKBIDQ8NI38 313 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 ZNF563Q8TA94 476 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 SMPDL3BQ92485 455 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 MAL2Q969L2 176 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 LRRC58Q96CX6 371 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 KLHL15Q96M94 604 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 DOCK7Q96N67 2140 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms