RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 PGRMC2O15173 223 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ACTL6AO96019 429 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 HNRNPCP07910 306 aaKnown RBP eCLIP4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 CT62P0C5K7 136 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 FAM58BPP0C7Q3 252 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 DHRS4L1P0CG22 281 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SLC35E2BP0CK96 405 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SLC35E2P0CK97 266 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 PIK3R1P27986 724 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ABCD3P28288 659 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 PTPN6P29350 595 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SERPINB1P30740 379 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SSTR1P30872 391 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 CASP2P42575 452 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 XKP51811 444 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 DIO3P55073 304 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SIRPAP78324 504 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 PHEXP78562 749 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 MRPS25P82663 173 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 HOXA4Q00056 320 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 DR1Q01658 176 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 FAM27E3Q08E93 113 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 PLCXD2Q0VAA5 305 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 FRG1Q14331 258 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SLMAPQ14BN4 828 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 EXOSC7Q15024 291 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 TIGD6Q17RP2 521 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 NHSL2Q5HYW2 709 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 CDKL4Q5MAI5 379 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 TIGD3Q6B0B8 471 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ENPP6Q6UWR7 440 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ZNF550Q7Z398 422 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 CMC1Q7Z7K0 106 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 TRABD2AQ86V40 505 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 NUDT13Q86X67 352 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 GRAMD2AQ8IUY3 354 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 CTAGE3PQ8IX95 158 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 LAS2Q8IYD9 372 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ZCCHC7Q8N3Z6 543 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ZNF441Q8N8Z8 693 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 CNEP1R1Q8N9A8 125 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 STAG3L4Q8TBR4 150 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ZPLD1Q8TCW7 415 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 PYROXD1Q8WU10 500 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SMPDL3BQ92485 455 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 CDKL2Q92772 493 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 PIGTQ969N2 578 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 LRRC39Q96DD0 335 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 WFIKKN1Q96NZ8 548 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 NODALQ96S42 347 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 PIGQQ9BRB3 760 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 MED18Q9BUE0 208 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SFXN3Q9BWM7 321 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 OSBPL11Q9BXB4 747 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 NXF5Q9H1B4 397 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 UBQLN3Q9H347 655 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ACTR8Q9H981 624 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 CXorf21Q9HAI6 301 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SAP30LQ9HAJ7 183 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SAYSD1Q9NPB0 183 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 NUDT4Q9NZJ9 180 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 DTX4Q9Y2E6 619 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 SNX24Q9Y343 169 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 ASB4Q9Y574 426 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 WIF1Q9Y5W5 379 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 KIAA1549Q9HCM3 1950 aa4.73□□□□□ -1.65
CTNNA1-239ENST00000523685 NCKAP5O14513 1909 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 CSPG4Q6UVK1 2322 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 A0A0A6YYD5 115 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 A0A1W2PNV4 684 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 GXYLT2A0PJZ3 443 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 FAM90A18PA6NE21 464 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 FAM90A16PA6NEW6 464 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 FAM90A9PA6NNJ1 464 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 EFCAB8A8MWE9 144 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 A8MXE2 369 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 FAM90A5PA8MXJ8 464 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 PLOD2O00469 737 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 ICOSLGO75144 302 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 ERAL1O75616 437 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 JTBO76095 146 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 SEC31AO94979 1220 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 RCBTB2O95199 551 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 GOSR1O95249 250 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 WISP3O95389 354 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 TGM6O95932 706 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 KLK1P06870 262 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 ABCB1P08183 1280 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 FAM90A15PP0C7V4 464 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 FAM90A14PP0C7W9 464 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 GFAPP14136 432 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 CPMP14384 443 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 CPN1P15169 458 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 GPX3P22352 226 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 BSGP35613 385 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 FEN1P39748 380 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 NR1H2P55055 460 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 RAB10P61026 200 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 CFHR3Q02985 330 aa4.72□□□□□ -1.65
CTNNA1-239ENST00000523685 DLG1Q12959 904 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms