RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 GOLGA8MH3BSY2 632 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 AP3B1O00203 1094 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 PLPP1O14494 284 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 TMPRSS11DO60235 418 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 SS18L1O75177 396 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 CDH16O75309 829 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 GCM2O75603 506 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 GPR75O95800 540 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 ALDOAP04075 364 aaKnown RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 CCDC175P0C221 793 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 NR2F6P10588 404 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 FCGR2AP12318 317 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 NCF1P14598 390 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 CREB1P16220 341 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 EPORP19235 508 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 HPDP32754 393 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 VPS41P49754 854 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 KIF5AQ12840 1032 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 SNTA1Q13424 505 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 BCL2A1Q16548 175 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 CAVIN1Q6NZI2 390 aaKnown RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 ZDHHC24Q6UX98 284 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 B3GLCTQ6Y288 498 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 GPR180Q86V85 440 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 C17orf47Q8NEP4 570 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 TOR1AIP2Q8NFQ8 470 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 ZNF473Q8WTR7 871 aaKnown RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 SLC9A6Q92581 669 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 TANKQ92844 425 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 SPSB4Q96A44 273 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 SERPINB12Q96P63 405 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 PELOQ9BRX2 385 aaKnown RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 ZNF717Q9BY31 904 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 TSGA10Q9BZW7 698 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 OR51B5Q9H339 312 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 CISD1Q9NZ45 108 aaKnown RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 NPAP1Q9NZP6 1156 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 NDRG4Q9ULP0 352 aaKnown RBP5.57□□□□□ -1.52
VPS13B-211ENST00000522802 ZNF337Q9Y3M9 751 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 DMRT1Q9Y5R6 373 aa5.57□□□□□ -1.52
VPS13B-211ENST00000522802 ARFGEF3Q5TH69 2177 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 MIF4GDA9UHW6 222 aaKnown RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 FAM157AC9JC47 383 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 GOLGA6L19H0YKK7 550 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 H7C417 338 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 ABCD4O14678 606 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 CLGNO14967 610 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 MBD3O95983 291 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 PLGP00747 810 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 TGFAP01135 160 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 TPM1P09493 284 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 SLC35E2BP0CK96 405 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 SLC35E2P0CK97 266 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 PCNAP12004 261 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 PEPDP12955 493 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 APEHP13798 732 aaKnown RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 ZNF37AP17032 561 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 S1PR1P21453 382 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 AGTR1P30556 359 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 SRP14P37108 136 aaKnown RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 NR4A2P43354 598 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 MAGEA6P43360 314 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 GAS1P54826 345 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 CDK16Q00536 496 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 COL10A1Q03692 680 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 E2F2Q14209 437 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 EXOSC7Q15024 291 aaKnown RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 SPA17Q15506 151 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 TSNQ15631 228 aaKnown RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 TRIP13Q15645 432 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 AP5B1Q2VPB7 878 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 TMEM35AQ53FP2 167 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 KHDRBS2Q5VWX1 349 aaKnown RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 RINLQ6ZS11 566 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 NUP54Q7Z3B4 507 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 CNGA4Q8IV77 575 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 LMNTD2Q8IXW0 634 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 GABRG1Q8N1C3 465 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 METTL25Q8N6Q8 603 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 SNX31Q8N9S9 440 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 STEAP2Q8NFT2 490 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 ZFAND2BQ8WV99 257 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 PROX1Q92786 737 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 ESAMQ96AP7 390 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 WDR34Q96EX3 536 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 HES6Q96HZ4 224 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 GMPPAQ96IJ6 420 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 NAP1L3Q99457 506 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 POTEKPQ9BYX7 375 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 FRMD8P1Q9BZ68 369 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-211ENST00000522802 OR10A4Q9H209 315 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 CXorf36Q9H7Y0 433 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 ZBTB26Q9HCK0 441 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 FAIMQ9NVQ4 179 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 ASIC3Q9UHC3 531 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 PHF11Q9UIL8 331 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 GPR52Q9Y2T5 361 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 OARD1Q9Y530 152 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 ASB4Q9Y574 426 aa5.56□□□□□ -1.52
VPS13B-211ENST00000522802 SNX13Q9Y5W8 968 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms