RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CAPS2Q9BXY5 557 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 VCPKMTQ9H867 229 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 AIPL1Q9NZN9 384 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 RABL2BQ9UNT1 228 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 MEMO1Q9Y316 297 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 POGZQ7Z3K3 1410 aa3.51□□□□□ -1.85
HMGB1P1-201ENST00000522557 ABCA7Q8IZY2 2146 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 FANCD2Q9BXW9 1451 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 LRP5LA4QPB2 252 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 B4DXG7 233 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 FCMRO60667 390 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 ECI2O75521 394 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 POU2F1P14859 743 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 ACADSP16219 412 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 CALB2P22676 271 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 PTBP1P26599 531 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 XCR1P46094 333 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 CCT3P49368 545 aaKnown RBP3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 EFNA3P52797 238 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 AIF1P55008 147 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 OC90Q02509 493 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 DDX39BQ13838 428 aaKnown RBP3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 Q1RN00 199 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 RABL6Q3YEC7 729 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 PAN3Q58A45 887 aaKnown RBP3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 UTF1Q5T230 341 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 OR8G2PQ6IF36 304 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 CXCL17Q6UXB2 119 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 P2RY8Q86VZ1 359 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 OR2L13Q8N349 312 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 BHLHE23Q8NDY6 225 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 CNDP1Q96KN2 507 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 NPAS2Q99743 824 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 CCT7Q99832 543 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 C19orf24Q9BVV8 132 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 GON7Q9BXV9 100 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 IL36GQ9NZH8 169 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 PTBP2Q9UKA9 531 aaKnown RBP3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 CLEC4AQ9UMR7 237 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 ERVW-1Q9UQF0 538 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 TIMM10BQ9Y5J6 103 aa3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 BAZ1AQ9NRL2 1556 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P1-201ENST00000522557 CEP164Q9UPV0 1460 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 XKRY2A2RUG3 117 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 CCT8L1PA6NM43 557 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 SNTNA6NMZ2 147 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 A8MX80 341 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 TPST2O60704 377 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 GPX5O75715 221 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 DUSP14O95147 198 aaKnown RBP3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 LYPD3O95274 346 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 PTGDSP41222 190 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 GNPDA1P46926 289 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 HNRNPA3P51991 378 aaKnown RBP3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 CRYBB1P53674 252 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 SLC8A3P57103 927 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 KLRB1Q12918 225 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 SLC10A1Q14973 349 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 CNPY1Q3B7I2 92 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 GLYR1Q49A26 553 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 SBK1Q52WX2 424 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 C16orf62Q7Z3J2 963 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 ACOT1Q86TX2 421 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 MARCH9Q86YJ5 346 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 KIR3DL3Q8N743 410 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 Q8N9G6 341 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 STXBP6Q8NFX7 210 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 OR4D9Q8NGE8 314 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 OR5B2Q96R09 309 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 CCT8L2Q96SF2 557 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 APOL2Q9BQE5 337 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 SLC35A5Q9BS91 424 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 TUBGCP2Q9BSJ2 902 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 PAXXQ9BUH6 204 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 CAB39LQ9H9S4 337 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 MIEF1Q9NQG6 463 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 SLC17A5Q9NRA2 495 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 NAALAD2Q9Y3Q0 740 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 THOC2Q8NI27 1593 aaKnown RBP3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 LRRK1Q38SD2 2015 aa3.49□□□□□ -1.85
HMGB1P1-201ENST00000522557 SMARCA4P51532 1647 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 UBXN8O00124 270 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 AP3B1O00203 1094 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 RS1O15537 224 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 B4GALT2O60909 372 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 STSP08842 583 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 MAP3K8P41279 467 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 DUSP3P51452 185 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 HSPA2P54652 639 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 RPL23AP62750 156 aaKnown RBP3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 MRPS11P82912 194 aaKnown RBP3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 IDI1Q13907 227 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 TP53I3Q53FA7 332 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 EIPR1Q53HC9 387 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 BOLA3Q53S33 107 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 BEND3Q5T5X7 828 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 TPGS2Q68CL5 300 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 OR4F3Q6IEY1 312 aa3.48□□□□□ -1.85
HMGB1P1-201ENST00000522557 ZSCAN25Q6NSZ9 544 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms