RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ERVK-16P61578 105 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 TEX19Q8NA77 164 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 OR51T1Q8NGJ9 327 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 FNDC8Q8TC99 324 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 ZFP57Q9NU63 452 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 SERPINA5P05154 406 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 AGTR1P30556 359 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 MAP4K2Q12851 820 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 NTRK2Q16620 822 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 BORAQ6PGQ7 559 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 MKXQ8IYA7 352 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 CLMPQ9H6B4 373 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 CARD8Q9Y2G2 431 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 CSNK1G3Q9Y6M4 447 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 RGPD2P0DJD1 1756 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 LOC105369274A0A096LPK9 316 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 CRTAPO75718 401 aaPredicted RBP15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 DCNP07585 359 aaKnown RBP15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 NPR2P20594 1047 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 WNT4P56705 351 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 LRRC37A5PQ49AS3 106 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 OR4N4Q8N0Y3 316 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 SLC46A1Q96NT5 459 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 C14orf119Q9NWQ9 140 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 DHCR7Q9UBM7 475 aaKnown RBP15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 GPR45Q9Y5Y3 372 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 GJB3O75712 270 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 MPIG6BO95866 241 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 ARL3P36405 182 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 SGSHP51688 502 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 SLC6A19Q695T7 634 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 PAPOLGQ9BWT3 736 aaKnown RBP15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 MRPS2Q9Y399 296 aaKnown RBP15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 HHLA1C9JL84 531 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 DNASE1P24855 282 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 REEP5Q00765 189 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 C17orf67Q0P5P2 114 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 KEAP1Q14145 624 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 EXT1Q16394 746 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 FAM83HQ6ZRV2 1179 aaPredicted RBP15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 LINC00696Q6ZRV3 163 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 PGBD5Q8N414 524 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 LINC01465Q8N7H1 131 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 OR5D14Q8NGL3 314 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 NT5C3BQ969T7 300 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 FOLH1BQ9HBA9 442 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 MITFO75030 526 aaPredicted RBP15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 POLR2HP52434 150 aaKnown RBP15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 PPA1Q15181 289 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 CSNK2A3Q8NEV1 391 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 NPRL2Q8WTW4 380 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 LCORQ96JN0 433 aaPredicted RBP15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 MICU1Q9BPX6 476 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 OR52D1Q9H346 318 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 HHLA2Q9UM44 414 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 MYH8P13535 1937 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 OPN1LWP04000 364 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 RGS19P49795 217 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 OR1Q1Q15612 314 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 FCRLBQ6BAA4 426 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 TRNP1Q6NT89 227 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 TMEM181Q9P2C4 612 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 DDAH2O95865 285 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 SLC22A10Q63ZE4 541 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 ASRGL1Q7L266 308 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 AAED1Q7RTV5 226 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 SLC16A14Q7RTX9 510 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 ESX1Q8N693 406 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 SENP5Q96HI0 755 aaPredicted RBP15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 LMF1Q96S06 567 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 CACNG6Q9BXT2 260 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 SLC6A20Q9NP91 592 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 OBP2BQ9NPH6 170 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 MGAT4CQ9UBM8 478 aa15.19■□□□□ 0.02
PCDHA3-201ENST00000522353 A0A1B0GX78 115 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 WDPCPO95876 746 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 TSFMP43897 325 aaKnown RBP15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 ADPRHP54922 357 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 SLC35A1P78382 337 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 COL28A1Q2UY09 1125 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 TP53I3Q53FA7 332 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 SLCO4C1Q6ZQN7 724 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 OR1J2Q8NGS2 313 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 ANKRD60Q9BZ19 345 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 WASH6PQ9NQA3 447 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 HCRTR1O43613 425 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 CXCL10P02778 98 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 EIF1P41567 113 aaKnown RBP15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 ENTPD8Q5MY95 495 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 PRAMEF20Q5VT98 475 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 YOD1Q5VVQ6 348 aaPredicted RBP15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 TECPR1Q7Z6L1 1165 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 SGCZQ96LD1 299 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 KLHL9Q9P2J3 617 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 NUMA1Q14980 2115 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 TRAV18A0A075B6X5 111 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 GPR171O14626 319 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 DPP4P27487 766 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 PTGER1P34995 402 aa15.18■□□□□ 0.02
PCDHA3-201ENST00000522353 PRSS3P35030 304 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms