RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 GADD45AP24522 165 aa16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 DCTN2Q13561 401 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 EBPQ15125 230 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 TMEM44Q2T9K0 475 aa16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 LINC00114Q6XXX2 140 aa16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 ZNF440Q8IYI8 595 aa16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 GAL3ST4Q96RP7 486 aa16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 MND1Q9BWT6 205 aa16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 CLEC2DQ9UHP7 191 aa16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 LSM2Q9Y333 95 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 CABIN1Q9Y6J0 2220 aa16.99■□□□□ 0.31
TRAPPC9-210ENST00000521667 RFPL3O75679 317 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 SAGP10523 405 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 CKMT1AP12532 417 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 TBXA2RP21731 343 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 ADH7P40394 386 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 CLK1P49759 484 aaKnown RBP16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 RAB40BQ12829 278 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 AADACL4Q5VUY2 407 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 C9orf40Q8IXQ3 194 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 OR13C2Q8NGS9 318 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 RFKQ969G6 155 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 RNFT2Q96EX2 444 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 COPS7AQ9UBW8 275 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 RARRES3Q9UL19 164 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 NUP210LQ5VU65 1888 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 UNC13CQ8NB66 2214 aa16.98■□□□□ 0.31
TRAPPC9-210ENST00000521667 AGRPO00253 132 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 SCDO00767 359 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 UTS2O95399 124 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 CER1O95813 267 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 MTNR1AP48039 350 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 ENTPD1P49961 510 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 GAS1P54826 345 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 FNDC7Q5VTL7 733 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 HLA-DQA1Q5Y7H0 255 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 NANOGP1Q8N7R0 232 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 SLC38A9Q8NBW4 561 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 FAM71CQ8NEG0 241 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 PROKR2Q8NFJ6 384 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 OR1N1Q8NGS0 311 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 IFI44Q8TCB0 444 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 STT3BQ8TCJ2 826 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 RACGAP1Q9H0H5 632 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 FBXO4Q9UKT5 387 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 SIGLEC7Q9Y286 467 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 RP1P56715 2156 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 IGLV3-12A0A075B6K2 115 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 BHLHE40O14503 412 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 HCN1O60741 890 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 CSO75390 466 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 SCRG1O75711 98 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 TIAF1O95411 115 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 NGFRP08138 427 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 GRK5P34947 590 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 GPR143P51810 404 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 CDH11P55287 796 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 COPZ1P61923 177 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 DOC2BQ14184 412 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 SPHARQ15513 63 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 MOGQ16653 247 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 TSTQ16762 297 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 TRIM61Q5EBN2 209 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 SMARCD3Q6STE5 483 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 LANCL3Q6ZV70 420 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 SLCO6A1Q86UG4 719 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 ZBTB46Q86UZ6 589 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 DYNC2LI1Q8TCX1 351 aa16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 DNAJA4Q8WW22 397 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 FGF20Q9NP95 211 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-210ENST00000521667 TTC28Q96AY4 2481 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 CCRL2O00421 344 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 MYL12BO14950 172 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 SLC2A10O95528 541 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 DAB2P98082 770 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 CD226Q15762 336 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 DGUOKQ16854 277 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 NKAIN1Q4KMZ8 207 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 C3orf38Q5JPI3 329 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 PWWP2BQ6NUJ5 590 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 SHISA6Q6ZSJ9 500 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 GATSQ8NAP1 163 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 ZHX1-C8orf76Q96EF9 292 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 OPALINQ96PE5 141 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 ADOQ96SZ5 270 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 ENKD1Q9H0I2 346 aa16.96■□□□□ 0.31
TRAPPC9-210ENST00000521667 ARHGAP33O14559 1287 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 PTP4A3O75365 173 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 SCG5P05408 212 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 INHBBP09529 407 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 SP9P0CG40 484 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 UBL4AP11441 157 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 LCN1P31025 176 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 TGFBR1P36897 503 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 CRYZQ08257 329 aaKnown RBP16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 NXNL2Q5VZ03 156 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 C19orf48Q6RUI8 117 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 SLC29A4Q7RTT9 530 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 PRR22Q8IZ63 422 aa16.96■□□□□ 0.3
TRAPPC9-210ENST00000521667 LNX2Q8N448 690 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms