RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 ZNF311Q5JNZ3 666 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 EXOSC6Q5RKV6 272 aaKnown RBP20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 PODNL1Q6PEZ8 512 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 DTNBP1Q96EV8 351 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 ART5Q96L15 291 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 MAN2C1Q9NTJ4 1040 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 COPS7AQ9UBW8 275 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 PPIEQ9UNP9 301 aaKnown RBP20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 DOCK10Q96BY6 2186 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 BCL10O95999 233 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 IGKV3-11P04433 115 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 ICAM2P13598 275 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 ZNF182P17025 639 aaPredicted RBP20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 PRKAR1BP31321 381 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 FUT7Q11130 342 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 COX10Q12887 443 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 AIMP2Q13155 320 aaKnown RBP20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 AQP6Q13520 282 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 TBCEQ15813 527 aaPredicted RBP20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 FHL5Q5TD97 284 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 SLX4IPQ5VYV7 408 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 C16orf62Q7Z3J2 963 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 TBC1D15Q8TC07 691 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 M1APQ8TC57 530 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 VMP1Q96GC9 406 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 ZNF223Q9UK11 482 aaPredicted RBP20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 C19orf53Q9UNZ5 99 aaPredicted RBP20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 KCNMB2Q9Y691 235 aa20.3■□□□□ 0.84
PTP4A3-204ENST00000521578 TRBV11-1A0A0K0K1C0 115 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 A6NL46 340 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 NME6O75414 186 aaPredicted RBP20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 SOX30O94993 753 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 CBX7O95931 251 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 ITGA3P26006 1051 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 SNRPGP62308 76 aaKnown RBP20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 TMEM236Q5W0B7 351 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 ELP5Q8TE02 316 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 THOC3Q96J01 351 aaKnown RBP20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 OR10A5Q9H207 317 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 TRIM45Q9H8W5 580 aaPredicted RBP20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 MMP25Q9NPA2 562 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 PKD1L2Q7Z442 2459 aa20.29■□□□□ 0.84
PTP4A3-204ENST00000521578 COQ9O75208 318 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 CLPSP04118 112 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 SERPINA7P05543 415 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 SLC37A1P57057 533 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 FOXD4Q12950 439 aaPredicted RBP20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 DUSP8Q13202 625 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 SPCS2Q15005 226 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 ARHGAP11BQ3KRB8 267 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 C12orf73Q69YU5 71 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 ZCCHC12Q6PEW1 402 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 SLC16A11Q8NCK7 471 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 OR52R1Q8NGF1 315 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 SEMA4CQ9C0C4 833 aa20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 QRSL1Q9H0R6 528 aaKnown RBP20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 POLR2J3Q9H1A7 115 aaKnown RBP20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 MTHFD2LQ9H903 347 aaPredicted RBP20.28■□□□□ 0.84
PTP4A3-204ENST00000521578 MAN1A2O60476 641 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 ZIC2O95409 532 aaPredicted RBP20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 TP53P04637 393 aaPredicted RBP20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 PSMB9P28065 219 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 CCL11P51671 97 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 HPCAP84074 193 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 C1orf94Q6P1W5 598 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 HSDL2Q6YN16 418 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 PTCHD4Q6ZW05 846 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 HMGN2P46Q86SG4 172 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 VRK2Q86Y07 508 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 GALNT16Q8N428 558 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 ZNF615Q8N8J6 731 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 OR4K5Q8NGD3 323 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 THAP3Q8WTV1 239 aaPredicted RBP20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 TRUB1Q8WWH5 349 aaKnown RBP20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 ZG16BQ96DA0 208 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 PLGRKTQ9HBL7 147 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 CLN6Q9NWW5 311 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 CNOT2Q9NZN8 540 aaKnown RBP20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 SLC13A4Q9UKG4 626 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 CHST2Q9Y4C5 530 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 USP24Q9UPU5 2620 aa20.27■□□□□ 0.84
PTP4A3-204ENST00000521578 SLC22A1O15245 554 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 PRKNO60260 465 aaPredicted RBP20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 POU1F1P28069 291 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 C21orf33P30042 268 aaPredicted RBP20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 IRF3Q14653 427 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 C19orf48Q6RUI8 117 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 FRRS1Q6ZNA5 592 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 ZER1Q7Z7L7 766 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 P2RY8Q86VZ1 359 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 OR7G1Q8NGA0 311 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 OR52P1PQ8NH57 321 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 BRIX1Q8TDN6 353 aaKnown RBP20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 SNRNP27Q8WVK2 155 aaKnown RBP20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 CDS1Q92903 461 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 DEFB126Q9BYW3 111 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 ANKRD19PQ9H560 264 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 AMBNQ9NP70 447 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 IFT52Q9Y366 437 aa20.27■□□□□ 0.83
PTP4A3-204ENST00000521578 EFCAB10A6NFE3 127 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms