RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CBFBQ13951 182 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 MAPK14Q16539 360 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 AGBL2Q5U5Z8 902 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 GTF2IRD2BQ6EKJ0 949 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 TYW3Q6IPR3 259 aaKnown RBP15.26■□□□□ 0.03
SQLE-205ENST00000521232 PPP4R4Q6NUP7 873 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 TNFAIP8L2Q6P589 184 aaPredicted RBP15.26■□□□□ 0.03
SQLE-205ENST00000521232 OLIG3Q7RTU3 272 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 GTF2IRD2Q86UP8 949 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 OR6K3Q8NGY3 331 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 PIWIL2Q8TC59 973 aaKnown RBP15.26■□□□□ 0.03
SQLE-205ENST00000521232 ZNF75CPQ92670 426 aaPredicted RBP15.26■□□□□ 0.03
SQLE-205ENST00000521232 RAB8BQ92930 207 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 ROPN1LQ96C74 230 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 WFIKKN1Q96NZ8 548 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 OR52E6Q96RD3 313 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 SLC35A5Q9BS91 424 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 PLEKHF2Q9H8W4 249 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 EMC9Q9Y3B6 208 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 WDR45Q9Y484 360 aa15.26■□□□□ 0.03
SQLE-205ENST00000521232 PRAMEF27A3QJZ7 478 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 CCDC154A6NI56 674 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 C16orf97H3BN30 126 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 KIAA0513O60268 411 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 PLGP00747 810 aaPredicted RBP15.25■□□□□ 0.03
SQLE-205ENST00000521232 C1QCP02747 245 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 IDO1P14902 403 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 CD1EP15812 388 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 SFTPDP35247 375 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 CHI3L1P36222 383 aaPredicted RBP15.25■□□□□ 0.03
SQLE-205ENST00000521232 UGT2B10P36537 528 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 KHKP50053 298 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 CTBP2P56545 445 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 FUT5Q11128 374 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 SKP2Q13309 424 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 QPRTQ15274 297 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 TMEM176BQ3YBM2 270 aaPredicted RBP15.25■□□□□ 0.03
SQLE-205ENST00000521232 SLC9B1Q4ZJI4 515 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 PDCD4Q53EL6 469 aaKnown RBP15.25■□□□□ 0.03
SQLE-205ENST00000521232 FBXW10Q5XX13 1052 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 EIF3MQ7L2H7 374 aaKnown RBP15.25■□□□□ 0.03
SQLE-205ENST00000521232 MAVSQ7Z434 540 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 TRIML2Q8N7C3 387 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 RFWD2Q8NHY2 731 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 ARL8AQ96BM9 186 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 PANX1Q96RD7 426 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 ZBTB18Q99592 522 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 FOXC2Q99958 501 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 THUMPD3Q9BV44 507 aaKnown RBP15.25■□□□□ 0.03
SQLE-205ENST00000521232 CXXC4Q9H2H0 198 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 TIGARQ9NQ88 270 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 CCM2LQ9NUG4 571 aaPredicted RBP15.25■□□□□ 0.03
SQLE-205ENST00000521232 CLEC4AQ9UMR7 237 aa15.25■□□□□ 0.03
SQLE-205ENST00000521232 C9JVG2 144 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 HMGN4O00479 90 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 SLC22A3O75751 556 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 CSTAP01040 98 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 IL6P05231 212 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 PABPC4LP0CB38 370 aaKnown RBP15.24■□□□□ 0.03
SQLE-205ENST00000521232 PGM1P36871 562 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 CDKN2CP42773 168 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 KCNJ5P48544 419 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 TXNL4AP83876 142 aaKnown RBP15.24■□□□□ 0.03
SQLE-205ENST00000521232 SELENBP1Q13228 472 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 ZNF239Q16600 458 aaKnown RBP15.24■□□□□ 0.03
SQLE-205ENST00000521232 GSTA3Q16772 222 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 NXNQ6DKJ4 435 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 FRRS1Q6ZNA5 592 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 ZNF621Q6ZSS3 439 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 ZNF619Q8N2I2 560 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 TMCO5AQ8N6Q1 288 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 ROBO4Q8WZ75 1007 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 ST8SIA1Q92185 356 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 CPNE4Q96A23 557 aaPredicted RBP15.24■□□□□ 0.03
SQLE-205ENST00000521232 ZG16BQ96DA0 208 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 INPP5KQ9BT40 448 aa15.24■□□□□ 0.03
SQLE-205ENST00000521232 UBTFL6P0CB48 400 aaPredicted RBP15.23■□□□□ 0.03
SQLE-205ENST00000521232 DNASE1P24855 282 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 CCKARP32238 428 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 CCR4P51679 360 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 CHRNEQ04844 493 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 TIGD2Q4W5G0 525 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 PAMR1Q6UXH9 720 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 RNF130Q86XS8 419 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 FAM71CQ8NEG0 241 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 RNF128Q8TEB7 428 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 ZFP90Q8TF47 636 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 MBD6Q96DN6 1003 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 REXO5Q96IC2 774 aaKnown RBP15.23■□□□□ 0.03
SQLE-205ENST00000521232 TRNT1Q96Q11 434 aaKnown RBP15.23■□□□□ 0.03
SQLE-205ENST00000521232 OR52B2Q96RD2 323 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 SRXN1Q9BYN0 137 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 COQ10BQ9H8M1 238 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 SDR39U1Q9NRG7 319 aaPredicted RBP15.23■□□□□ 0.03
SQLE-205ENST00000521232 KLHL28Q9NXS3 571 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 ZNF226Q9NYT6 803 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 ZIM2Q9NZV7 527 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 LIPT1Q9Y234 373 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 SLC35A3Q9Y2D2 325 aa15.23■□□□□ 0.03
SQLE-205ENST00000521232 PLEKHA6Q9Y2H5 1048 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms