RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 HYAL4Q2M3T9 481 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 IFI44LQ53G44 452 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 CARM1Q86X55 608 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 PLCZ1Q86YW0 608 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 MISPQ8IVT2 679 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 SIAH3Q8IW03 269 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 FAM109AQ8N4B1 249 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 OR2M3Q8NG83 312 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 OR4K17Q8NGC6 315 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 OR6T1Q8NGN1 323 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 VANGL1Q8TAA9 524 aaPredicted RBP13.92□□□□□ -0.18
LSM1-203ENST00000520755 PHF10Q8WUB8 498 aaKnown RBP13.92□□□□□ -0.18
LSM1-203ENST00000520755 CANT1Q8WVQ1 401 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 GEMIN6Q8WXD5 167 aaKnown RBP13.92□□□□□ -0.18
LSM1-203ENST00000520755 SLC47A1Q96FL8 570 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 PYURFQ96I23 114 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 C7orf34Q96L11 122 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 BARD1Q99728 777 aaKnown RBP13.92□□□□□ -0.18
LSM1-203ENST00000520755 SLX1AQ9BQ83 275 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 LAT2Q9GZY6 243 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 CACYBPQ9HB71 228 aaKnown RBP13.92□□□□□ -0.18
LSM1-203ENST00000520755 MED11Q9P086 117 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 FBXL2Q9UKC9 423 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 ZNF232Q9UNY5 417 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 SH3GLB1Q9Y371 365 aa13.92□□□□□ -0.18
LSM1-203ENST00000520755 SVILO95425 2214 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 H3BNH8 94 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 HCRTR2O43614 444 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 EIF4E2O60573 245 aaKnown RBP13.91□□□□□ -0.18
LSM1-203ENST00000520755 ENTPD5O75356 428 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 TRAPPC6AO75865 159 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 STAMBPO95630 424 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 MT-ND1P03886 318 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 MAGEA2P43356 314 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 TDGF1P3P51864 188 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 RGS8P57771 180 aaPredicted RBP13.91□□□□□ -0.18
LSM1-203ENST00000520755 C17orf67Q0P5P2 114 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 EPS8Q12929 822 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 IGFBP7Q16270 282 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 CMPK2Q5EBM0 449 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 ZNF605Q86T29 641 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 TMCO5AQ8N6Q1 288 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 LZICQ8WZA0 190 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 PROX1Q92786 737 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 DUS3LQ96G46 650 aaKnown RBP13.91□□□□□ -0.18
LSM1-203ENST00000520755 GPR137Q96N19 417 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 SEPHS2Q99611 448 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 PRR14Q9BWN1 585 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 AMBRA1Q9C0C7 1298 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 DSN1Q9H410 356 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 MAGIXQ9H6Y5 334 aa13.91□□□□□ -0.18
LSM1-203ENST00000520755 GTPBP1O00178 669 aaKnown RBP13.9□□□□□ -0.18
LSM1-203ENST00000520755 CBR3O75828 277 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 CYP7B1O75881 506 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 WISP1O95388 367 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 GPIP06744 558 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 EDN3P14138 238 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 FUT4P22083 530 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 TCEA1P23193 301 aaKnown RBP13.9□□□□□ -0.18
LSM1-203ENST00000520755 P2RX1P51575 399 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 HSF1Q00613 529 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 SLC10A1Q14973 349 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 TOMM34Q15785 309 aaPredicted RBP13.9□□□□□ -0.18
LSM1-203ENST00000520755 ZSWIM7Q19AV6 140 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 FKBP9P1Q75LS8 142 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 B4GALNT2Q8NHY0 566 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 SLC35B4Q969S0 331 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 MIB2Q96AX9 1013 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 RSRC1Q96IZ7 334 aaKnown RBP13.9□□□□□ -0.18
LSM1-203ENST00000520755 UBQLN3Q9H347 655 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 ZDHHC11Q9H8X9 412 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 DKKL1Q9UK85 242 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 LIPGQ9Y5X9 500 aa13.9□□□□□ -0.18
LSM1-203ENST00000520755 PRRC2CQ9Y520 2896 aaKnown RBP13.89□□□□□ -0.19
LSM1-203ENST00000520755 MED12Q93074 2177 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 ANKUB1A6NFN9 424 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 H3BNX3 289 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 J3KTA2 159 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 hCG_2039718K7EN88 272 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 PRSS23O95084 383 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 UMPSP11172 480 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 ENDOUP21128 410 aaKnown RBP13.89□□□□□ -0.19
LSM1-203ENST00000520755 PSMA4P25789 261 aaKnown RBP13.89□□□□□ -0.19
LSM1-203ENST00000520755 CCR4P51679 360 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 SUMO3P55854 103 aaPredicted RBP13.89□□□□□ -0.19
LSM1-203ENST00000520755 ELF3P78545 371 aaPredicted RBP13.89□□□□□ -0.19
LSM1-203ENST00000520755 KCNC4Q03721 635 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 KRTCAP3Q53RY4 240 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 GFRALQ6UXV0 394 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 ZGRF1Q86YA3 2104 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 PAPD5Q8NDF8 572 aaKnown RBP13.89□□□□□ -0.19
LSM1-203ENST00000520755 TOR1AIP2Q8NFQ8 470 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 OR5W2Q8NH69 310 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 GPR119Q8TDV5 335 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 PYDC1Q8WXC3 89 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 NPAS1Q99742 590 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 UGT2B28Q9BY64 529 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 SLC6A15Q9H2J7 730 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 ARMC7Q9H6L4 198 aa13.89□□□□□ -0.19
LSM1-203ENST00000520755 LDAHQ9H6V9 325 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms