RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ULK3Q6PHR2 472 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 ZNF517Q6ZMY9 492 aaPredicted RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 COMMD2Q86X83 199 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 ZFPM2Q8WW38 1151 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 CDADC1Q9BWV3 514 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 SLC22A4Q9H015 551 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 BRD7Q9NPI1 651 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 EXTL2Q9UBQ6 330 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 TESQ9UGI8 421 aaKnown RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 ZNF221Q9UK13 617 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 KCND3Q9UK17 655 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 DOCK9Q9BZ29 2069 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 HEATR5BQ9P2D3 2071 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 IDH3BO43837 385 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 PLGP00747 810 aaPredicted RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 TGFBR2P37173 567 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 LSSP48449 732 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 OR1D5P58170 312 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 DUSP8Q13202 625 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 SERTAD2Q14140 314 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 C3orf38Q5JPI3 329 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 OR5M10Q6IEU7 315 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 ARHGAP11AQ6P4F7 1023 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 ZNF620Q6ZNG0 422 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 MEPCEQ7L2J0 689 aaKnown RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 ZNF595Q8IYB9 648 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 IZUMO1Q8IYV9 350 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 ASB12Q8WXK4 309 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 PIGKQ92643 395 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 SENP5Q96HI0 755 aaPredicted RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 ZNF681Q96N22 645 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 MENTQ9BUN1 341 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 PHF7Q9BWX1 381 aaPredicted RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 CUTCQ9NTM9 273 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 CCDC59Q9P031 241 aaKnown RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 FAM47E-STBD1D6RA91 191 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 LRRN3E7EW58 273 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 CT62P0C5K7 136 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 CD27P26842 260 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 NKX2-5P52952 324 aaPredicted RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 CTXN1P60606 82 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 FOXK2Q01167 660 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 ZP2Q05996 745 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 TMEM184AQ6ZMB5 413 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 Q8N402 240 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 YIPF7Q8N8F6 280 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 POMGNT2Q8NAT1 580 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 UXS1Q8NBZ7 420 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 DAZLQ92904 295 aaKnown RBP9.41□□□□□ -0.9
MCF2-209ENST00000520602 C4orf36Q96KX1 117 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 AICDAQ9GZX7 198 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 LRRN3Q9H3W5 708 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 OSGIN1Q9UJX0 560 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 ZDBF2Q9HCK1 2354 aa9.41□□□□□ -0.9
MCF2-209ENST00000520602 TRBV2A0A0J9YWF9 115 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 FAM221BA6H8Z2 402 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 PPM1BO75688 479 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 RENP00797 406 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 GP1BBP13224 206 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 CCR5P51681 352 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 ATP12AP54707 1039 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 NRG3P56975 720 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 ZFP69Q49AA0 526 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 PRAMEF17Q5VTA0 474 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 C12orf73Q69YU5 71 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 ZNF544Q6NX49 715 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 LEG1Q6P5S2 330 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 OR2L13Q8N349 312 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 ZNF676Q8N7Q3 588 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 SLC37A3Q8NCC5 494 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 OR8K3Q8NH51 312 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 GPBAR1Q8TDU6 330 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 SMPDL3BQ92485 455 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 DIO2Q92813 273 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 BEX2Q9BXY8 128 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 AKIP1Q9NQ31 210 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 MCUBQ9NWR8 336 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 BABAM2Q9NXR7 383 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 CES1P1Q9UKY3 287 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 PIPP12273 146 aaPredicted RBP9.4□□□□□ -0.9
MCF2-209ENST00000520602 CD1CP29017 333 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 SOX18P35713 384 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 MANEAQ5SRI9 462 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 MED25Q71SY5 747 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 FGD2Q7Z6J4 655 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 SMRP1Q8NCR6 262 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 RCBTB1Q8NDN9 531 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 TMEM52Q8NDY8 209 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 OR8D4Q8NGM9 314 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 OR6N2Q8NGY6 317 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 OR5W2Q8NH69 310 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 MROQ9BYG7 248 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 S1PR5Q9H228 398 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 UBE2ZQ9H832 354 aaPredicted RBP9.4□□□□□ -0.9
MCF2-209ENST00000520602 STMN3Q9NZ72 180 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 GMEB2Q9UKD1 530 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 POMT2Q9UKY4 750 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 SLC35A3Q9Y2D2 325 aa9.4□□□□□ -0.9
MCF2-209ENST00000520602 CENPVL1A0A0U1RR11 272 aa9.4□□□□□ -0.91
MCF2-209ENST00000520602 ZNF670-ZNF695F2Z2N8 137 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms