RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 UBQLN2Q9UHD9 624 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 PTBP2Q9UKA9 531 aaKnown RBP2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 POMPQ9Y244 141 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMED7Q9Y3B3 224 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 AP4B1Q9Y6B7 739 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 BTAF1O14981 1849 aa2.7□□□□□ -1.98
HMGB1P41-201ENST00000520234 CLUHO75153 1309 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZFC3H1O60293 1989 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 IGLV4-3A0A075B6K6 122 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 IGKV6D-21A0A0A0MT36 114 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 MAGEB16A2A368 324 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 A4D1N5 150 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 GLTPD2A6NH11 291 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 E7ESA3 106 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 M0QX08 132 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSMD12O00232 456 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 BET1O15155 118 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSTPIP1O43586 416 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 PROSCO94903 275 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 GLCEO94923 617 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 POP4O95707 220 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CPNE6O95741 557 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CRYZL1O95825 349 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 GOT2P00505 430 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 HPRP00739 348 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SERPINA6P08185 405 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 ASNSP08243 561 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 MMP10P09238 476 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 MYL2P10916 166 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 YWHABP31946 246 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 FCGR2BP31994 310 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 FCGR2CP31995 323 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 RPL9P32969 192 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDH5P33151 784 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 MAGEA4P43358 317 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 GCLMP48507 274 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 HSPA13P48723 471 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC26A2P50443 739 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 GPX6P59796 221 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SNAP25P60880 206 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SRPXP78539 464 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 BASP1P80723 227 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 GALK2Q01415 458 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CYP24A1Q07973 514 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 TCP10Q12799 353 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SELPLGQ14242 412 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 POU6F1Q14863 301 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF146Q15072 292 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SNRNP35Q16560 246 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 ACKR1Q16570 336 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 RFTN2Q52LD8 501 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SEL1L2Q5TEA6 688 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF343Q6P1L6 599 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 IDO2Q6ZQW0 420 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CENPUQ71F23 418 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 LPCAT2Q7L5N7 544 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 PIWIL3Q7Z3Z3 882 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC47A2Q86VL8 602 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 RNF130Q86XS8 419 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 AQP12AQ8IXF9 295 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 KATNAL2Q8IYT4 538 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 GPD1LQ8N335 351 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC43A2Q8N370 569 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 LINC00469Q8N7U9 141 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 C8orf46Q8TAG6 207 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF564Q8TBZ8 553 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SAP25Q8TEE9 199 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 FAM222BQ8WU58 562 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 DCAKDQ8WVC6 231 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 TFB1MQ8WVM0 346 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 MCUR1Q96AQ8 359 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 TAMM41Q96BW9 452 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 VMP1Q96GC9 406 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDHR1Q96JP9 859 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 RNF170Q96K19 258 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCDC77Q9BR77 488 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CBWD1Q9BRT8 395 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 THTPAQ9BU02 230 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 PINK1Q9BXM7 581 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 GCOM2Q9BZD3 368 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 C2orf40Q9H1Z8 148 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 RMND5AQ9H871 391 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 DBNDD1Q9H9R9 158 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 SYTL2Q9HCH5 934 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 MRPL47Q9HD33 250 aaKnown RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 ACP6Q9NPH0 428 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 FBXO8Q9NRD0 319 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMOD2Q9NZR1 351 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 ARMCX1Q9P291 453 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 THAP10Q9P2Z0 257 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 HMGXB4Q9UGU5 601 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 PILRAQ9UKJ1 303 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 KLF2Q9Y5W3 355 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 AUP1Q9Y679 476 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 CNTNAP1P78357 1384 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 LOXHD1Q8IVV2 1947 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 UBR3Q6ZT12 1888 aa2.69□□□□□ -1.98
HMGB1P41-201ENST00000520234 MN1Q10571 1320 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CITO14578 2027 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 IGKV3D-20A0A0C4DH25 116 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms