RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 FAM47E-STBD1D6RA91 191 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 CDC40O60508 579 aaKnown RBP eCLIP16.16■□□□□ 0.18
SDC2-205ENST00000520233 TPST2O60704 377 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 ZNF24P17028 368 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 PSMA4P25789 261 aaKnown RBP16.16■□□□□ 0.18
SDC2-205ENST00000520233 DPP4P27487 766 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 GDF1P27539 372 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 IDH2P48735 452 aaKnown RBP16.16■□□□□ 0.18
SDC2-205ENST00000520233 ERFP50548 548 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 COPZ1P61923 177 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 QPRTQ15274 297 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 TOMM34Q15785 309 aaPredicted RBP16.16■□□□□ 0.18
SDC2-205ENST00000520233 GLYR1Q49A26 553 aaPredicted RBP16.16■□□□□ 0.18
SDC2-205ENST00000520233 RNFT1Q5M7Z0 435 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 ARSKQ6UWY0 536 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 DEF8Q6ZN54 512 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 FAM109AQ8N4B1 249 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 LSMEM1Q8N8F7 131 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 ZNF563Q8TA94 476 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 PHF10Q8WUB8 498 aaKnown RBP16.16■□□□□ 0.18
SDC2-205ENST00000520233 TMEM234Q8WY98 164 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 ST8SIA1Q92185 356 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 DUS3LQ96G46 650 aaKnown RBP16.16■□□□□ 0.18
SDC2-205ENST00000520233 TAAR6Q96RI8 345 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 TRIM2Q9C040 744 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 OR2B2Q9GZK3 357 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 POLR2J2Q9GZM3 115 aaKnown RBP16.16■□□□□ 0.18
SDC2-205ENST00000520233 POLR2J3Q9H1A7 115 aaKnown RBP16.16■□□□□ 0.18
SDC2-205ENST00000520233 IL1RAPQ9NPH3 570 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 MED17Q9NVC6 651 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 LUZP4Q9P127 313 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 CFAP47Q6ZTR5 3102 aa16.16■□□□□ 0.18
SDC2-205ENST00000520233 ETV2O00321 342 aaPredicted RBP16.15■□□□□ 0.18
SDC2-205ENST00000520233 ZIC3O60481 467 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 CRYABP02511 175 aaKnown RBP16.15■□□□□ 0.18
SDC2-205ENST00000520233 FABP3P05413 133 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 HPNP05981 417 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 RAP2AP10114 183 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 GP1BBP13224 206 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 PRKCAP17252 672 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 ITGA2P17301 1181 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 HK1P19367 917 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 HTR2AP28223 471 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 MAGEA2P43356 314 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 MAGEA5P43359 124 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 DLX5P56178 289 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 VLDLRP98155 873 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 TOMM20Q15388 145 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 PLPPR5Q32ZL2 321 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 IQCCQ4KMZ1 466 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 SLC25A53Q5H9E4 307 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 ENTPD8Q5MY95 495 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 WBP2NLQ6ICG8 309 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 PIWIL3Q7Z3Z3 882 aaKnown RBP16.15■□□□□ 0.18
SDC2-205ENST00000520233 TSEN54Q7Z6J9 526 aaKnown RBP16.15■□□□□ 0.18
SDC2-205ENST00000520233 ZDHHC21Q8IVQ6 265 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 C10orf67Q8IYJ2 551 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 LSM14AQ8ND56 463 aaKnown RBP16.15■□□□□ 0.18
SDC2-205ENST00000520233 PAPD5Q8NDF8 572 aaKnown RBP16.15■□□□□ 0.18
SDC2-205ENST00000520233 ZBTB8AQ96BR9 441 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 ZNF524Q96C55 264 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 PRR14Q9BWN1 585 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 ZDHHC11Q9H8X9 412 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 TMEM27Q9HBJ8 222 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 CCM2LQ9NUG4 571 aaPredicted RBP16.15■□□□□ 0.18
SDC2-205ENST00000520233 ACER3Q9NUN7 267 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 AURKCQ9UQB9 309 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 VDAC3Q9Y277 283 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 ENPP4Q9Y6X5 453 aa16.15■□□□□ 0.18
SDC2-205ENST00000520233 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 C7orf72A4D263 438 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 TFECO14948 347 aaPredicted RBP16.14■□□□□ 0.17
SDC2-205ENST00000520233 ATXN7O15265 892 aaPredicted RBP16.14■□□□□ 0.17
SDC2-205ENST00000520233 TRAPPC6AO75865 159 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 MST1P26927 711 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 SLC1A3P43003 542 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 SESN3P58005 492 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 ALDH6A1Q02252 535 aaKnown RBP16.14■□□□□ 0.17
SDC2-205ENST00000520233 SLC10A1Q14973 349 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 OR1Q1Q15612 314 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 ZNF613Q6PF04 617 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 CADM2Q8N3J6 435 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 FAM83FQ8NEG4 500 aaPredicted RBP16.14■□□□□ 0.17
SDC2-205ENST00000520233 NR4A3Q92570 626 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 MRGPRX4Q96LA9 322 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 PRRC1Q96M27 445 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 ZNF300Q96RE9 604 aaPredicted RBP16.14■□□□□ 0.17
SDC2-205ENST00000520233 ACKR4Q9NPB9 350 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 NDUFAF4Q9P032 175 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 RPS6KB2Q9UBS0 482 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 NTNG1Q9Y2I2 539 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 FAM32AQ9Y421 112 aaKnown RBP16.14■□□□□ 0.17
SDC2-205ENST00000520233 NINQ8N4C6 2090 aa16.14■□□□□ 0.17
SDC2-205ENST00000520233 LOC400499M0QZD8 3231 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 CPSF4LA6NMK7 179 aaKnown RBP16.13■□□□□ 0.17
SDC2-205ENST00000520233 hCG_2039718K7EN88 272 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 SEMA7AO75326 666 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 NTN1O95631 604 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 RHCEP18577 417 aa16.13■□□□□ 0.17
SDC2-205ENST00000520233 ADH6P28332 368 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms