RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ESPNLQ6ZVH7 1005 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 LARP4Q71RC2 724 aaKnown RBP eCLIP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 BHLHA15Q7RTS1 189 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 LRRC70Q7Z2Q7 622 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 REC114Q7Z4M0 266 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 GGNQ86UU5 652 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 LSRQ86X29 649 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 NUDT13Q86X67 352 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 LSMEM1Q8N8F7 131 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SNX31Q8N9S9 440 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SPERTQ8NA61 448 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 OR10D3Q8NH80 312 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 HDAC2Q92769 488 aaKnown RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 C3orf49Q96BT1 292 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 TLCD1Q96CP7 247 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 MTBPQ96DY7 904 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 COG8Q96MW5 612 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 BTBD9Q96Q07 612 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 HBEGFQ99075 208 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 INPP5KQ9BT40 448 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 NAT9Q9BTE0 207 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SUCNR1Q9BXA5 334 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 ITPAQ9BY32 194 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 FAM107BQ9H098 131 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 NSRP1Q9H0G5 558 aaKnown RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 METTL17Q9H7H0 456 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 DDX31Q9H8H2 851 aaKnown RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 FKRPQ9H9S5 495 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SAYSD1Q9NPB0 183 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 TIGARQ9NQ88 270 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 SMYD2Q9NRG4 433 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 MED29Q9NX70 200 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 KLHL13Q9P2N7 655 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 CTNNAL1Q9UBT7 734 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 BCAP29Q9UHQ4 241 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 CARD8Q9Y2G2 431 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 WBP11Q9Y2W2 641 aaKnown RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 CAB39Q9Y376 341 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-207ENST00000520168 ASB4Q9Y574 426 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 PCDHB14Q9Y5E9 798 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 PCDHGB1Q9Y5G3 927 aa4.31□□□□□ -1.72
SDCBP-207ENST00000520168 A0A0A6YYD5 115 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 A0A1W2PR48 441 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 B4DSR2 109 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 E7EQL1 145 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 FOXE1O00358 373 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 DNALI1O14645 258 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ADAMDEC1O15204 470 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 RGS16O15492 202 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 TSPAN2O60636 221 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 DNAJA2O60884 412 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GUCY1B2O75343 617 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PRKRAO75569 313 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 REM1O75628 298 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 TIPRLO75663 272 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PGM3O95394 542 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ADAP00813 363 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 AHSGP02765 367 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ERCC1P07992 297 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 F7P08709 466 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ABHD2P08910 425 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PCNAP12004 261 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PGAM1P18669 254 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GGT1P19440 569 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 S1PR1P21453 382 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 TCEA1P23193 301 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GIFP27352 417 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 APEX1P27695 318 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 APOBEC3AP31941 199 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 MDH1P40925 334 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GDF5P43026 501 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 MAGEA3P43357 314 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 XKP51811 444 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PSMD4P55036 377 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 CDH15P55291 814 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 MAGOHP61326 146 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 SNRPD2P62316 118 aaKnown RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GNGT1P63211 74 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 CUL3Q13618 768 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 CRYMQ14894 314 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 STK11Q15831 433 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 NNATQ16517 81 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PRICKLE4Q2TBC4 344 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ARL13AQ5H913 290 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 OR5M10Q6IEU7 315 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 ADNP2Q6IQ32 1131 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 FAM180BQ6P0A1 224 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GALNT5Q7Z7M9 940 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GALNT10Q86SR1 603 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PRUNE1Q86TP1 453 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 GLCCI1Q86VQ1 547 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PPIL6Q8IXY8 311 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 SLC43A2Q8N370 569 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 RIBC1Q8N443 379 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-207ENST00000520168 PDPRQ8NCN5 879 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 OR2M3Q8NG83 312 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 OR7G3Q8NG95 312 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 FBXO30Q8TB52 745 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 RNF128Q8TEB7 428 aa4.3□□□□□ -1.72
SDCBP-207ENST00000520168 CDKL2Q92772 493 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms