RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SLC25A51Q9H1U9 297 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 MED4Q9NPJ6 270 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 RIC8AQ9NPQ8 531 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 EHFQ9NZC4 300 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 ANK2Q01484 3957 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 IGKV3D-7A0A0C4DH55 119 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 IGKV3OR2-268A0A0C4DH90 116 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 C2orf92A0A1B0GVN3 265 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 MEI4A8MW99 385 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 NPIPA5E9PKD4 350 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 ADCY5O95622 1261 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 ALPPP05187 535 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 IGKV5-2P06315 115 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 CD55P08174 381 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 EPORP19235 508 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 EMDP50402 254 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZNF41P51814 821 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 HNRNPFP52597 415 aaKnown RBP-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 AGKQ53H12 422 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 FAM78AQ5JUQ0 283 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 TMEM69Q5SWH9 247 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZNF322Q6U7Q0 402 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 FAM47EQ6ZV65 393 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 CYS1Q717R9 158 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 ACTL9Q8TC94 416 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 ACOT11Q8WXI4 607 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 TM4SF19Q96DZ7 209 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 CXCL16Q9H2A7 254 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 CLMPQ9H6B4 373 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 CAB39LQ9H9S4 337 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 ANKMY1Q9P2S6 941 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 PCYOX1Q9UHG3 505 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 NPIPA1Q9UND3 350 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 YARS2Q9Y2Z4 477 aaKnown RBP-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 PCDHGA1Q9Y5H4 931 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 LRRFIP2Q9Y608 721 aaKnown RBP-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 HECTD4Q9Y4D8 3996 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 KMT2AQ03164 3969 aa-2.12□□□□□ -2.75
RNU6-539P-201ENST00000516665 ASH1LQ9NR48 2969 aaKnown RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 AFF2P51816 1311 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 NYNRINQ9P2P1 1898 aaKnown RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 A0A0G2JRQ6 117 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 CDRT15L2A8MXV6 281 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 TMEM150CB9EJG8 249 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 E9PBE3 544 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 H3BRN7 92 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 C15orf65H3BRN8 121 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 MANBAO00462 879 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 CYB561D2O14569 222 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 PSMA7O14818 248 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 BUB1O43683 1085 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 RANBP6O60518 1105 aaKnown RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 TSPAN2O60636 221 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 GCM2O75603 506 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 SPINK1P00995 79 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 RB1P06400 928 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 PRPS2P11908 318 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 HNRNPH3P31942 346 aaKnown RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 MAGEA12P43365 314 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 IDH2P48735 452 aaKnown RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 KLK7P49862 253 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 MTCP1P56278 107 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 PTENP60484 403 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 RPP38P78345 283 aaKnown RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 IRX3P78415 501 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 IL1RL1Q01638 556 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 ASPHQ12797 758 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 SRSF6Q13247 344 aaKnown RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 CYP51A1Q16850 503 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 KCTD16Q68DU8 428 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 PDPK2PQ6A1A2 396 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 C16orf87Q6PH81 154 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 SARM1Q6SZW1 724 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 KRT74Q7RTS7 529 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 CDH26Q8IXH8 852 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZFP41Q8N8Y5 198 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 FANK1Q8TC84 345 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 MCOLN3Q8TDD5 553 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 CD300LFQ8TDQ1 290 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 SAP25Q8TEE9 199 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 PTPMT1Q8WUK0 201 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 TMEM80Q96HE8 168 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 CMTM3Q96MX0 182 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 RBBP8Q99708 897 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 SRXN1Q9BYN0 137 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 NACAP1Q9BZK3 213 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 RAB9BQ9NP90 201 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 NRN1Q9NPD7 142 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 NLRC4Q9NPP4 1024 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 OR1A2Q9Y585 309 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 MAB21L2Q9Y586 359 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 KIAA1549Q9HCM3 1950 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZNF292O60281 2723 aa-2.13□□□□□ -2.75
RNU6-539P-201ENST00000516665 APC2O95996 2303 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 NCKAP5O14513 1909 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 ALPK3Q96L96 1907 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 IGLV1-36A0A0B4J1U3 117 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 CCDC162PA2VCL2 907 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZNF705EA8MWA4 302 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 F5H0A9 414 aaPredicted RBP-2.14□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms