RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 PTCHD1Q96NR3 888 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 UBQLN3Q9H347 655 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 NT5DC2Q9H857 520 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 HINT3Q9NQE9 182 aaKnown RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 CLDND1Q9NY35 253 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 FBXL3Q9UKT7 428 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ANK1P16157 1881 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 B4DGG1 531 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 WRBO00258 174 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 CREBL2O60519 120 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 IGHA2P01877 340 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 TM4SF4P48230 202 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 RPS21P63220 83 aaKnown RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 LSM11P83369 360 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMG7-215ENST00000515829 OC90Q02509 493 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 MRPL2Q5T653 305 aaKnown RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 SLC22A10Q63ZE4 541 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 RPL13AP3Q6NVV1 102 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 FAM111BQ6SJ93 734 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ZNF322Q6U7Q0 402 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 METAP1DQ6UB28 335 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 RNF165Q6ZSG1 346 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 C12orf40Q86WS4 652 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 SIAH3Q8IW03 269 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 LSM14AQ8ND56 463 aaKnown RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 BARHL1Q9BZE3 327 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 CST11Q9H112 138 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 GRHPRQ9UBQ7 328 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 C19orf25Q9UFG5 118 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 ZNF726A6NNF4 738 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 APOC3P02656 99 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 FUT1P19526 365 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 TEAD1P28347 426 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 BCL6P41182 706 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 P2RY2P41231 377 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 EFR3AQ14156 821 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ARHGAP11AQ6P4F7 1023 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ESPNLQ6ZVH7 1005 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 TECPR1Q7Z6L1 1165 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ANKRD53Q8N9V6 530 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ABHD4Q8TB40 342 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ZFPM2Q8WW38 1151 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 VN1R3Q9BXE9 311 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 SIDT1Q9NXL6 827 aaKnown RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 MEMO1Q9Y316 297 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 RNGTTO60942 597 aaKnown RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 ZNF780AO75290 641 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 RP2O75695 350 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 SNAPC5O75971 98 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 MAPK3P27361 379 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 BSGP35613 385 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 OR10A3P58181 314 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 CRMP1Q14194 572 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 MAPK14Q16539 360 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ZXDCQ2QGD7 858 aaPredicted RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 TMEM150AQ86TG1 271 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ZNF227Q86WZ6 799 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 TMEM99Q8N816 258 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 AMER3Q8N944 861 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 SGTBQ96EQ0 304 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 TMEM43Q9BTV4 400 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ISG20L2Q9H9L3 353 aaKnown RBP9.54□□□□□ -0.88
SMG7-215ENST00000515829 SLAMF7Q9NQ25 335 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 CENPMQ9NSP4 180 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 COPZ2Q9P299 210 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 CHST2Q9Y4C5 530 aa9.54□□□□□ -0.88
SMG7-215ENST00000515829 ACOD1A6NK06 481 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 FFAR1O14842 300 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 HRGP04196 525 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 TCRBP04435 133 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 HTR1FP30939 366 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 HCCSP53701 268 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 REEP5Q00765 189 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 DCST2Q5T1A1 773 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 GARNL3Q5VVW2 1013 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 PNLDC1Q8NA58 520 aaKnown RBP9.53□□□□□ -0.88
SMG7-215ENST00000515829 ZDHHC1Q8WTX9 485 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 ST6GAL2Q96JF0 529 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 MSLNLQ96KJ4 702 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 SCGB3A2Q96PL1 93 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 PELOQ9BRX2 385 aaKnown RBP9.53□□□□□ -0.88
SMG7-215ENST00000515829 SLC17A9Q9BYT1 436 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 FBRSQ9HAH7 460 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 TRPV4Q9HBA0 871 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 KCMF1Q9P0J7 381 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 MYEF2Q9P2K5 600 aaKnown RBP9.53□□□□□ -0.88
SMG7-215ENST00000515829 KCNE3Q9Y6H6 103 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 A0A0B4J203 849 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 A0A1W2PR48 441 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 CDHR4A6H8M9 788 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 PVRP15151 417 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 VAMP1P23763 118 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 EVX1P49640 407 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 IRF4Q15306 451 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 LEG1Q6P5S2 330 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 MBOAT2Q6ZWT7 520 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 ZNF550Q7Z398 422 aa9.53□□□□□ -0.88
SMG7-215ENST00000515829 GALNTL5Q7Z4T8 443 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms