RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MPP2Q14168 576 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 TOMM34Q15785 309 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF141Q15928 474 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.45
TCOF1-215ENST00000515516 TNFAIP8L3Q5GJ75 292 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 SPANXN4Q5MJ08 99 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 ATG16L1Q676U5 607 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 TNFAIP8L2Q6P589 184 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-215ENST00000515516 FCRLAQ7L513 359 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 SLC43A2Q8N370 569 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 MIPOL1Q8TD10 442 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 MGARPQ8TDB4 240 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 ZFP90Q8TF47 636 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 OIT3Q8WWZ8 545 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 PIGTQ969N2 578 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 TACO1Q9BSH4 297 aaKnown RBP12.21□□□□□ -0.45
TCOF1-215ENST00000515516 THUMPD3Q9BV44 507 aaKnown RBP12.21□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF350Q9GZX5 532 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 UBTD1Q9HAC8 227 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 POLE3Q9NRF9 147 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 THAP1Q9NVV9 213 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 NKIRAS1Q9NYS0 192 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 MARCOQ9UEW3 520 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-215ENST00000515516 GPR52Q9Y2T5 361 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 WDR45Q9Y484 360 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 DOCK7Q96N67 2140 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 HIVEP1P15822 2718 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 ESPNB1AK53 854 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SLCO1B7G3V0H7 640 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 EFNA2O43921 213 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SMPD2O60906 423 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 ERLIN1O75477 346 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 UGT2B17O75795 530 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 GUSBP08236 651 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 UBTFL6P0CB48 400 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-215ENST00000515516 PGCP20142 388 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SHC1P29353 583 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 CCKARP32238 428 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 NKX6-1P78426 367 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-215ENST00000515516 LRRC74AQ0VAA2 488 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 CASP8Q14790 479 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 ACKR1Q16570 336 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 FAM174BQ3ZCQ3 159 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 GPAT3Q53EU6 434 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SLC25A53Q5H9E4 307 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 BEX5Q5H9J7 111 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 OGFOD2Q6N063 350 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 C3orf33Q6P1S2 294 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 STAC2Q6ZMT1 411 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 P3H2Q8IVL5 708 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 ZNF563Q8TA94 476 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 RNF128Q8TEB7 428 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 ABHD3Q8WU67 409 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 ST8SIA1Q92185 356 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 RAB8BQ92930 207 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 ROPN1LQ96C74 230 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 NEURL3Q96EH8 262 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SLC35A5Q9BS91 424 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 HDHD5Q9BXW7 423 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SRXN1Q9BYN0 137 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 ACTR6Q9GZN1 396 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 OR10A4Q9H209 315 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SERHL2Q9H4I8 314 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 GP6Q9HCN6 339 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 KLHL13Q9P2N7 655 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 BTNL2Q9UIR0 455 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SLC35A3Q9Y2D2 325 aa12.2□□□□□ -0.46
TCOF1-215ENST00000515516 SPIN1Q9Y657 262 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-215ENST00000515516 A0A1W2PPR1 153 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 TMEM120BA0PK00 339 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 HDAC3O15379 428 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 DIAPH2O60879 1101 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 SCN2BO60939 215 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 YES1P07947 543 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 KITP10721 976 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 FOSL1P15407 271 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 ENPP1P22413 925 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 NR1H2P55055 460 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 RAC3P60763 192 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 UFM1P61960 85 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 PHC1P78364 1004 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 TXNL4AP83876 142 aaKnown RBP12.19□□□□□ -0.46
TCOF1-215ENST00000515516 MERTKQ12866 999 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 TIGD2Q4W5G0 525 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 SHEQ5VZ18 495 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 SAXO2Q658L1 398 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 NXNQ6DKJ4 435 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 HEPHL1Q6MZM0 1159 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 C20orf204Q6ZNR8 217 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 WFDC8Q8IUA0 241 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 TUSC5Q8IXB3 177 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 ZNF619Q8N2I2 560 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 CCDC115Q96NT0 180 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 OR5B2Q96R09 309 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 PANX1Q96RD7 426 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 CCL19Q99731 98 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 PIP5K1AQ99755 562 aa12.19□□□□□ -0.46
TCOF1-215ENST00000515516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-215ENST00000515516 ACER3Q9NUN7 267 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms