RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MED4Q9NPJ6 270 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.49□□□□□ -0.57
CLCN3-210ENST00000515420 MRGBPQ9NV56 204 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 P2RX2Q9UBL9 471 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 PACSIN3Q9UKS6 424 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 MCTS1Q9ULC4 181 aaKnown RBP11.49□□□□□ -0.57
CLCN3-210ENST00000515420 TRIM33Q9UPN9 1127 aa11.49□□□□□ -0.57
CLCN3-210ENST00000515420 A0A1W2PNV4 684 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 AGAP5A6NIR3 686 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 EEF1E1-BLOC1S5C9J1V9 151 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 MSTNO14793 375 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 EEF1E1O43324 174 aaKnown RBP11.48□□□□□ -0.57
CLCN3-210ENST00000515420 TNFSF13O75888 250 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 CHRM4P08173 479 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 NR2F1P10589 423 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 PPIBP23284 216 aaKnown RBP11.48□□□□□ -0.57
CLCN3-210ENST00000515420 CRATP43155 626 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 SLC6A8P48029 635 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 CCR4P51679 360 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 CRISP3P54108 245 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 CHRNEQ04844 493 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 FOXF2Q12947 444 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 SELENBP1Q13228 472 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 QPRTQ15274 297 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 GUSBP1Q15486 140 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 TOMM34Q15785 309 aaPredicted RBP11.48□□□□□ -0.57
CLCN3-210ENST00000515420 MAPK14Q16539 360 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 SYPL1Q16563 259 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 SGCBQ16585 318 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 NDUFAF6Q330K2 333 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 HSP90B2PQ58FF3 399 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 PRAMEF8Q5VWM4 474 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 PRAMEF7Q5VXH5 474 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 METTL21CQ5VZV1 264 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 GCNT2Q8N0V5 402 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 LILRA2Q8N149 483 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 ANKFN1Q8N957 763 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 OR10D3Q8NH80 312 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 OR2V1Q8NHB1 315 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 FBXO27Q8NI29 283 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 FNDC9Q8TBE3 224 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 TSPEARQ8WU66 669 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 TMEM234Q8WY98 164 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 FIG4Q92562 907 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 KLHL15Q96M94 604 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 PAIP1Q9H074 479 aaKnown RBP11.48□□□□□ -0.57
CLCN3-210ENST00000515420 SLC52A3Q9NQ40 469 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 GLRX2Q9NS18 164 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 CCDC167Q9P0B6 97 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 PCDHB14Q9Y5E9 798 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 DSPPQ9NZW4 1301 aa11.48□□□□□ -0.57
CLCN3-210ENST00000515420 A0A0J9YW62 118 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 TMEM247A6NEH6 219 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 NR5A2O00482 541 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 FAAHO00519 579 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 ATP8B1O43520 1251 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 SYNGR4O95473 234 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 C1QCP02747 245 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 DBIP07108 87 aaKnown RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 UBTFL6P0CB48 400 aaPredicted RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 BMP2P12643 396 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 NID1P14543 1247 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 CAPN3P20807 821 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 FKBP2P26885 142 aaKnown RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 UQCRC1P31930 480 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 EIF1AXP47813 144 aaKnown RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 DSTNP60981 165 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 RGNQ15493 299 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 ZSWIM7Q19AV6 140 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 GTDC1Q4AE62 458 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 HBMQ6B0K9 141 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 C3orf33Q6P1S2 294 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 SLC2A7Q6PXP3 512 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 PLXDC2Q6UX71 529 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 OLIG3Q7RTU3 272 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 PEX5LQ8IYB4 626 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 RFWD2Q8NHY2 731 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 PNPT1Q8TCS8 783 aaKnown RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 SLC25A43Q8WUT9 341 aaPredicted RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 CPNE4Q96A23 557 aaPredicted RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 ZG16BQ96DA0 208 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 GMPPAQ96IJ6 420 aaPredicted RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF845Q96IR2 970 aaPredicted RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 THUMPD3Q9BV44 507 aaKnown RBP11.47□□□□□ -0.57
CLCN3-210ENST00000515420 ZNF385DQ9H6B1 395 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 MCCC2Q9HCC0 563 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 NPHS2Q9NP85 383 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 TIGARQ9NQ88 270 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 CORO2BQ9UQ03 480 aa11.47□□□□□ -0.57
CLCN3-210ENST00000515420 A0A1W2PP18 115 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 CLIC1O00299 241 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 TNFSF11O14788 317 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 EFNA2O43921 213 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 AQP8O94778 261 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 GOSR1O95249 250 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 TFPTP0C1Z6 253 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 PABPC4LP0CB38 370 aaKnown RBP11.46□□□□□ -0.57
CLCN3-210ENST00000515420 TROVE2P10155 538 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLCN3-210ENST00000515420 CD8BP10966 210 aa11.46□□□□□ -0.57
CLCN3-210ENST00000515420 ETFAP13804 333 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms