RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MASP1P48740 699 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 RGS8P57771 180 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 NPTX1Q15818 432 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 TMEM44Q2T9K0 475 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 FAM98BQ52LJ0 330 aaKnown RBP10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 PCSK4Q6UW60 755 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 FKBP9P1Q75LS8 142 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 TSEN54Q7Z6J9 526 aaKnown RBP10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 RANBP3LQ86VV4 465 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 SLC22A16Q86VW1 577 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 CARM1Q86X55 608 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 GATSQ8NAP1 163 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 OR4D11Q8NGI4 311 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 OR6T1Q8NGN1 323 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 C1GALT1C1Q96EU7 318 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 TTTY12Q9BZ98 90 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 TRIM2Q9C040 744 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 OR2B2Q9GZK3 357 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 DSN1Q9H410 356 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 ZNF703Q9H7S9 590 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 ZDHHC11Q9H8X9 412 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 C12orf10Q9HB07 376 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 KLHL1Q9NR64 748 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 ARMC1Q9NVT9 282 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 B4GALT7Q9UBV7 327 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 ANAPC2Q9UJX6 822 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 SH3GLB1Q9Y371 365 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 HRH3Q9Y5N1 445 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 ENPP4Q9Y6X5 453 aa10.89□□□□□ -0.67
PDLIM5-220ENST00000514830 C2orf72A6NCS6 295 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 G3V3Y1 287 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 GNB5O14775 395 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 TPST2O60704 377 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 RASAL1O95294 804 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 LINGO3P0C6S8 592 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 THRBP10828 461 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 ZNF17P17021 662 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 SLC7A1P30825 629 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 EIF1P41567 113 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 SLC1A3P43003 542 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 HTR3AP46098 478 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 MAP2K6P52564 334 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 GPR85P60893 370 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 CHRNB3Q05901 458 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 KLRB1Q12918 225 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 KPNB1Q14974 876 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 INPP5JQ15735 1006 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 PLPPR5Q32ZL2 321 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 NDUFAF6Q330K2 333 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 PLEKHN1Q494U1 663 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 WBP2NLQ6ICG8 309 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 ZFP1Q6P2D0 407 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 ZNF613Q6PF04 617 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 SPATA24Q86W54 205 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 LACC1Q8IV20 430 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 FAM109AQ8N4B1 249 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 Q8NA96 180 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 OR4K17Q8NGC6 315 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 CANT1Q8WVQ1 401 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 TMEM234Q8WY98 164 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 ZBTB8AQ96BR9 441 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 SLC47A1Q96FL8 570 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 MRGPRX4Q96LA9 322 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 GNRHR2Q96P88 292 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 WFDC6Q9BQY6 131 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 AMBRA1Q9C0C7 1298 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 ADAM19Q9H013 955 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 ACKR4Q9NPB9 350 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 ACER3Q9NUN7 267 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 MED11Q9P086 117 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 FBXL2Q9UKC9 423 aa10.88□□□□□ -0.67
PDLIM5-220ENST00000514830 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 C17orf51A8MQB3 221 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 LINC01387J3KSC0 135 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 M0R3H8 397 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 ACOT7O00154 380 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 AP3D1O14617 1153 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 ZIC3O60481 467 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 CDC40O60508 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 SEMA7AO75326 666 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 PRSS23O95084 383 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 OR5F1O95221 314 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 FABP3P05413 133 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 RFPL3SP0C7P2 107 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 GKN3PP0CG01 181 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 PRG2P13727 222 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 PRKCAP17252 672 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 RHCEP18577 417 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 MST1P26927 711 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 HTR2AP28223 471 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 OR1E2P47887 323 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 ZNF41P51814 821 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 COPZ1P61923 177 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 VLDLRP98155 873 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 GK3PQ14409 553 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 OR5M10Q6IEU7 315 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 AAGABQ6PD74 315 aa10.87□□□□□ -0.67
PDLIM5-220ENST00000514830 GTPBP8Q8N3Z3 284 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms