RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 RLIMQ9NVW2 624 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 HCFC1R1Q9NWW0 138 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 VNN3Q9NY84 501 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 FBXL2Q9UKC9 423 aa10.56□□□□□ -0.72
TCOF1-211ENST00000513346 C14orf166Q9Y224 244 aaKnown RBP10.56□□□□□ -0.72
TCOF1-211ENST00000513346 D6RAR5 112 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 AK4P27144 223 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SPINT3P49223 89 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 GGTA1PQ4G0N0 100 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 ABCA11PQ4W5N1 156 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 TCEAL5Q5H9L2 206 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 CHST14Q8NCH0 376 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 F2RL3Q96RI0 385 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 PHB2Q99623 299 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 Q9N2J8 555 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 INPP5EQ9NRR6 644 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 CAMK2AQ9UQM7 478 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 TEX13DA0A0J9YY54 714 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SLC9B1P1A6NJY1 282 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 I6L893 689 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 RTCAO00442 366 aaKnown RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SSX4O60224 188 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 MAS1P04201 325 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 CBLP22681 906 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 RBMXP38159 391 aaKnown RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF616Q08AN1 781 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 ANKRD33Q7Z3H0 272 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 BCDIN3DQ7Z5W3 292 aaKnown RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SYNPRQ8TBG9 265 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SLC41A3Q96GZ6 507 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 C1QTNF3Q9BXJ4 246 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 ZNF226Q9NYT6 803 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 PRELID3BQ9Y3B1 194 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 ARAP2Q8WZ64 1704 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 ADAM12O43184 909 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 PIP5K1CO60331 668 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 TSPAN15O95858 294 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SFTPBP07988 381 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 MAOBP27338 520 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 TP53I3Q53FA7 332 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 PYCR3Q53H96 274 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 PAN3Q58A45 887 aaKnown RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SBSNQ6UWP8 590 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 SLC29A4Q7RTT9 530 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 MEX3DQ86XN8 651 aaKnown RBP10.55□□□□□ -0.72
TCOF1-211ENST00000513346 ACBD4Q8NC06 268 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 WDR20Q8TBZ3 569 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 DCUN1D4Q92564 292 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 C3orf49Q96BT1 292 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 HS6ST2Q96MM7 605 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 KATNB1Q9BVA0 655 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 PINK1Q9BXM7 581 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 C20orf85Q9H1P6 137 aa10.55□□□□□ -0.72
TCOF1-211ENST00000513346 TMEM129A0AVI4 362 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 E9PI62 339 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 CASC3O15234 703 aaKnown RBP10.54□□□□□ -0.72
TCOF1-211ENST00000513346 DRD2P14416 443 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 GABRB1P18505 474 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 C5AR1P21730 350 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 TMUB2Q71RG4 321 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 NLRC3Q7RTR2 1065 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 GPR155Q7Z3F1 870 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 ESX1Q8N693 406 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 SSX3Q99909 188 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 CLSTN3Q9BQT9 956 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 SLC6A16Q9GZN6 736 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 KIAA1551Q9HCM1 1747 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 KLHL42Q9P2K6 505 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 SLC6A5Q9Y345 797 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 OR5K4A6NMS3 321 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 RAB40ALP0C0E4 278 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 CPEP16870 476 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 ELK1P19419 428 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 RAB5CP51148 216 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 HOXC5Q00444 222 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 PGGHGQ32M88 737 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 FAM180BQ6P0A1 224 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 ARL14Q8N4G2 192 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 PLA2G15Q8NCC3 412 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 CLRN3Q8NCR9 226 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 RAB40AQ8WXH6 277 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 WDFY2Q96P53 400 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 UNKLQ9H9P5 680 aaKnown RBP10.54□□□□□ -0.72
TCOF1-211ENST00000513346 MCCC2Q9HCC0 563 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 OR6C65A6NJZ3 312 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 BLOC1S5-TXNDC5H3BN57 136 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 SLC16A8O95907 504 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 VAMP2P63027 116 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 ENPP2Q13822 863 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 RBMS2Q15434 407 aaKnown RBP10.54□□□□□ -0.72
TCOF1-211ENST00000513346 SSX2Q16385 188 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 FAM83HQ6ZRV2 1179 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-211ENST00000513346 GLCCI1Q86VQ1 547 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 OR6N2Q8NGY6 317 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 NEK7Q8TDX7 302 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 MARC2Q969Z3 335 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 C4orf36Q96KX1 117 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 FBRSQ9HAH7 460 aa10.54□□□□□ -0.72
TCOF1-211ENST00000513346 TSTD3H0UI37 97 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms