RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SERPINA2P20848 420 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 PTPN6P29350 595 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 PRDX6P30041 224 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 CASP3P42574 277 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 KRT83P78385 493 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 MYBPC1Q00872 1141 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 CSTF1Q05048 431 aaKnown RBP1.03□□□□□ -2.24
PDGFC-208ENST00000512711 GFPT1Q06210 699 aaPredicted RBP1.03□□□□□ -2.24
PDGFC-208ENST00000512711 KIR2DS1Q14954 304 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 TIGITQ495A1 244 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 FAM74A3Q4VXF1 159 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 FAM159AQ6UWV7 190 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 LANCL3Q6ZV70 420 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 TMCO5AQ8N6Q1 288 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 CYB561D1Q8N8Q1 229 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 ZSCAN4Q8NAM6 433 aaPredicted RBP1.03□□□□□ -2.24
PDGFC-208ENST00000512711 OR2L8Q8NGY9 312 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 UBALD1Q8TB05 177 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 CNIH3Q8TBE1 160 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 IL1F10Q8WWZ1 152 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 PGLYRP4Q96LB8 373 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 TSG101Q99816 390 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 SPIN2AQ99865 258 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 SPIN2BQ9BPZ2 258 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 NFKBIZQ9BYH8 718 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 B3GNT2Q9NY97 397 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 WRAP73Q9P2S5 460 aaPredicted RBP1.03□□□□□ -2.24
PDGFC-208ENST00000512711 GALPQ9UBC7 116 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 P2RX2Q9UBL9 471 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 KIF25Q9UIL4 384 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 PLLPQ9Y342 182 aa1.03□□□□□ -2.24
PDGFC-208ENST00000512711 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.03□□□□□ -2.24
PDGFC-208ENST00000512711 A0A0U1RQG5 324 aaPredicted RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 SULT2B1O00204 365 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 RBBP9O75884 186 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 NDUFA7O95182 113 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 HSP90AB1P08238 724 aaKnown RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 GIPP09681 153 aaPredicted RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 CHTF8P0CG12 524 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 BCKDHAP12694 445 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 GCFC2P16383 781 aaKnown RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 CRISP2P16562 243 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 UQCRC2P22695 453 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 ATP5A1P25705 553 aaKnown RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 AKT2P31751 481 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 PRDX2P32119 198 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 BDKRB1P46663 353 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 TFPI2P48307 235 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 SH3BGRP55822 239 aaPredicted RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 SLC10A7Q0GE19 358 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 ARFRP1Q13795 201 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 NRF1Q16656 503 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 ZNF674Q2M3X9 581 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 ABCA11PQ4W5N1 156 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 C5orf47Q569G3 176 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 PIGGQ5H8A4 983 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 TET2Q6N021 2002 aaPredicted RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 FAM199XQ6PEV8 388 aaPredicted RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 TMEM26Q6ZUK4 368 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 ARCQ7LC44 396 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 C6orf120Q7Z4R8 191 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 HMGN2P46Q86SG4 172 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 MMAAQ8IVH4 418 aaKnown RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 Q8N976 141 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 NKAPP1Q8N9T2 125 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 FRZBQ92765 325 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 ATP6V0A1Q93050 837 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 RMI2Q96E14 147 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 TSNARE1Q96NA8 513 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 KCNA7Q96RP8 456 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 KLHDC3Q9BQ90 382 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 TEX13AQ9BXU3 409 aaPredicted RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 FTHL17Q9BXU8 183 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 EML4Q9HC35 981 aaKnown RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 LHX9Q9NQ69 397 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 C1orf123Q9NWV4 160 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 COMMD8Q9NX08 183 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 CYP39A1Q9NYL5 469 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 BCAP29Q9UHQ4 241 aa1.02□□□□□ -2.25
PDGFC-208ENST00000512711 EIF3LQ9Y262 564 aaKnown RBP1.02□□□□□ -2.25
PDGFC-208ENST00000512711 ITGB4P16144 1822 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 IGSF9BQ9UPX0 1349 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 PPIAL4EA0A075B759 164 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 PPIAL4CA0A0B4J2A2 164 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 HMGB1P1B2RPK0 211 aaPredicted RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 PPIAL4DF5H284 164 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 GOSR1O95249 250 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 DCNP07585 359 aaKnown RBP1.01□□□□□ -2.25
PDGFC-208ENST00000512711 HBQ1P09105 142 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 RHOXF2BP0C7M4 288 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 PPIAL4FP0DN26 164 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 NMUP48645 174 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 BIDP55957 195 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 ACTA2P62736 377 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 ACTC1P68032 377 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 RGS1Q08116 209 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 WASHC5Q12768 1159 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 LY6G6FQ5SQ64 297 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 C1orf146Q5VVC0 180 aa1.01□□□□□ -2.25
PDGFC-208ENST00000512711 NEK5Q6P3R8 708 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms