RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 TIMP4Q99727 224 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 PRRG4Q9BZD6 226 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 PAIP1Q9H074 479 aaKnown RBP6.78□□□□□ -1.32
NR1I3-231ENST00000512340 VCX3BQ9H321 246 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 CALHM2Q9HA72 323 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 TMEM165Q9HC07 324 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 CHST11Q9NPF2 352 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 EXOSC3Q9NQT5 275 aaKnown RBP6.78□□□□□ -1.32
NR1I3-231ENST00000512340 TINAGQ9UJW2 476 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 FBXL2Q9UKC9 423 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 VDAC3Q9Y277 283 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 CARD8Q9Y2G2 431 aa6.78□□□□□ -1.32
NR1I3-231ENST00000512340 RPH3AQ9Y2J0 694 aaPredicted RBP6.78□□□□□ -1.32
NR1I3-231ENST00000512340 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
NR1I3-231ENST00000512340 LOC100653049A0A140TA62 436 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 H3BML4 177 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 DVL2O14641 736 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 GMFGO60234 142 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SNX3O60493 162 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 FCMRO60667 390 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 DNAJA2O60884 412 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 UGT2B17O75795 530 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 KRT34O76011 436 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SYNGR4O95473 234 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 EPPINO95925 133 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 RPSAP08865 295 aaKnown RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 CELA3AP09093 270 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 TFPTP0C1Z6 253 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 UBTFL6P0CB48 400 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 BMP2P12643 396 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 NID1P14543 1247 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 GPX2P18283 190 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 PRDX6P30041 224 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SLC7A1P30825 629 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 CHRNB4P30926 498 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 IFNA8P32881 189 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 ZFP36L2P47974 494 aaKnown RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 NCALDP61601 193 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 RAC1P63000 192 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 CHRNEQ04844 493 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SRYQ05066 204 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 CRYZQ08257 329 aaKnown RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SF3A3Q12874 501 aaKnown RBP eCLIP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SELENBP1Q13228 472 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 CAPRIN1Q14444 709 aaKnown RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SYPL1Q16563 259 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 RUNDC3AQ59EK9 446 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF311Q5JNZ3 666 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 RIPPLY2Q5TAB7 128 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 DESI1Q6ICB0 168 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 TYW3Q6IPR3 259 aaKnown RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 FRRS1Q6ZNA5 592 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 MRGPRGQ86SM5 289 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 PATL1Q86TB9 770 aaKnown RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SERPINA11Q86U17 422 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 MTDHQ86UE4 582 aaKnown RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SNX32Q86XE0 403 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 GRAMD2AQ8IUY3 354 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 MCEMP1Q8IX19 187 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 ULK2Q8IYT8 1036 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 ANKFN1Q8N957 763 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 HIPK4Q8NE63 616 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 OR52P1PQ8NH57 321 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SLC38A5Q8WUX1 472 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 NTNG2Q96CW9 530 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 LRRC58Q96CX6 371 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 ZHX1-C8orf76Q96EF9 292 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 ARSGQ96EG1 525 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 TMEM19Q96HH6 336 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 HOPXQ9BPY8 73 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 TREX2Q9BQ50 279 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 UGT2B28Q9BY64 529 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 PRDM14Q9GZV8 571 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF385DQ9H6B1 395 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 TMEM38AQ9H6F2 299 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 BCL2L10Q9HD36 194 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 PNPLA3Q9NST1 481 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 MED17Q9NVC6 651 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 DCAF16Q9NXF7 216 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 UBAP1Q9NZ09 502 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 RPS6KB2Q9UBS0 482 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 MCTS1Q9ULC4 181 aaKnown RBP6.77□□□□□ -1.33
NR1I3-231ENST00000512340 SLC6A5Q9Y345 797 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 KCNE3Q9Y6H6 103 aa6.77□□□□□ -1.33
NR1I3-231ENST00000512340 ICE1Q9Y2F5 2266 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 DOPEY1Q5JWR5 2465 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ITPR2Q14571 2701 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 NPIPA5A0A0B4J1W7 369 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 OR2M5A3KFT3 312 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 CFAP73A6NFT4 308 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 CD8B2A6NJW9 211 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 NPIPA7E9PJI5 369 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 NPIPB9F8W1W9 429 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 GSTA4O15217 222 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ZIC3O60481 467 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 SEMA7AO75326 666 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 TNFRSF21O75509 655 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 PGM3O95394 542 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 FAM107AO95990 144 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 PLGP00747 810 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms