RNA–Protein interactions for RNA: ENST00000510173.6

RBM4-208, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-208	ENST00000510173	SDR39U1	Q9NRG7	319 aa	Predicted RBP	12.81	□□□□□ -0.36
RBM4-208	ENST00000510173	DUSP22	Q9NRW4	184 aa		12.81	□□□□□ -0.36
RBM4-208	ENST00000510173	GIN1	Q9NXP7	522 aa		12.81	□□□□□ -0.36
RBM4-208	ENST00000510173	ZIM2	Q9NZV7	527 aa		12.81	□□□□□ -0.36
RBM4-208	ENST00000510173	GPR45	Q9Y5Y3	372 aa		12.81	□□□□□ -0.36
RBM4-208	ENST00000510173	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173		A0A1W2PRB8	838 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	GJE1	A6NN92	205 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173		H3BNH8	94 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	SIAH2	O43255	324 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	AKAP10	O43572	662 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	ATP6V1C1	P21283	382 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	CLNS1A	P54105	237 aa	Known RBP	12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	POU6F2	P78424	691 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	PLPPR5	Q32ZL2	321 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	HBM	Q6B0K9	141 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	ANKRD26P1	Q6NSI1	321 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	FIGNL1	Q6PIW4	674 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	PLEKHM3	Q6ZWE6	761 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	YTHDF3	Q7Z739	585 aa	Known RBP	12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	FITM2	Q8N6M3	262 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	OR4C3	Q8NH37	302 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	B4GALNT2	Q8NHY0	566 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	FAM110B	Q8TC76	370 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	GIMAP5	Q96F15	307 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	ADGRG7	Q96K78	797 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	STAC	Q99469	402 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	BTBD2	Q9BX70	525 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	GSX2	Q9BZM3	304 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	DPY30	Q9C005	99 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	HOXD1	Q9GZZ0	328 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	CXorf56	Q9H5V9	222 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	ZNF385D	Q9H6B1	395 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	ZCCHC3	Q9NUD5	404 aa	Known RBP	12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	MED17	Q9NVC6	651 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	ATAD3A	Q9NVI7	634 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	SNX8	Q9Y5X2	465 aa		12.8	□□□□□ -0.36
RBM4-208	ENST00000510173	CXCL13	O43927	109 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	SLC22A3	O75751	556 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	ACP2	P11117	423 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	PRDX6	P30041	224 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	SUMO3	P55854	103 aa	Predicted RBP	12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	CLDN8	P56748	225 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	KLF10	Q13118	480 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	KRT72	Q14CN4	511 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	RNPS1	Q15287	305 aa	Known RBP	12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	DUSP5	Q16690	384 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	AGK	Q53H12	422 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	C6orf89	Q6UWU4	347 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	CCDC121	Q6ZUS5	278 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	GLB1L3	Q8NCI6	653 aa	Predicted RBP	12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	SLC16A11	Q8NCK7	471 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	OR56A1	Q8NGH5	318 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	CLHC1	Q8NHS4	586 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	FBXO30	Q8TB52	745 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	CPNE4	Q96A23	557 aa	Predicted RBP	12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	CMTM5	Q96DZ9	223 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	KLHL15	Q96M94	604 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173		Q96MF0	132 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	RNF145	Q96MT1	663 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	PRPF18	Q99633	342 aa	Known RBP	12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	CCDC106	Q9BWC9	280 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	GP6	Q9HCN6	339 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	ARMCX1	Q9P291	453 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	GPR52	Q9Y2T5	361 aa		12.79	□□□□□ -0.36
RBM4-208	ENST00000510173	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	SHISA8	B8ZZ34	492 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173		H7C1Q1	480 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	TNFSF11	O14788	317 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	SCAMP2	O15127	329 aa	Known RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	PSMB1	P20618	241 aa	Known RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	PRPS1L1	P21108	318 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	PSMA4	P25789	261 aa	Known RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	ADH6	P28332	368 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	SLC6A8	P48029	635 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	MNAT1	P51948	309 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	CARD18	P57730	90 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	DPY19L1	Q2PZI1	675 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	CTU2	Q2VPK5	515 aa	Known RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	ZNF385B	Q569K4	471 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	ANKRD34A	Q69YU3	496 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	BHLHB9	Q6PI77	547 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	STAC2	Q6ZMT1	411 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	GALNT10	Q86SR1	603 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	GATS	Q8NAP1	163 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	STEAP2	Q8NFT2	490 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	RP9	Q8TA86	221 aa	Known RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	TSPEAR	Q8WU66	669 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	TMEM171	Q8WVE6	324 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	MOAP1	Q96BY2	351 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	FAM120B	Q96EK7	910 aa	Known RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	PERP	Q96FX8	193 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	HS3ST6	Q96QI5	342 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	USB1	Q9BQ65	265 aa	Known RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	TACO1	Q9BSH4	297 aa	Known RBP	12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	HDHD5	Q9BXW7	423 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	ACTR6	Q9GZN1	396 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	PIGU	Q9H490	435 aa		12.78	□□□□□ -0.36
RBM4-208	ENST00000510173	NGB	Q9NPG2	151 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms