RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 TNFRSF13CQ96RJ3 184 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 VN1R1Q9GZP7 353 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 PLGRKTQ9HBL7 147 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 APMAPQ9HDC9 416 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 ALPK2Q86TB3 2170 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 PPP1R3DO95685 299 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 RAB36O95755 333 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 ZNF791Q3KP31 576 aaPredicted RBP13.69□□□□□ -0.22
PHF3-209ENST00000509330 CDK20Q8IZL9 346 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 ZSCAN1Q8NBB4 408 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 OR52L1Q8NGH7 329 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 ADAMTS18Q8TE60 1221 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 HS6ST2Q96MM7 605 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 ZNF559Q9BR84 538 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 G6PC3Q9BUM1 346 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 RTN4RQ9BZR6 473 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 KRCC1Q9NPI7 259 aaPredicted RBP13.69□□□□□ -0.22
PHF3-209ENST00000509330 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.69□□□□□ -0.22
PHF3-209ENST00000509330 A0A1B0GX78 115 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 SERINC4A6NH21 518 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 CCRL2O00421 344 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 INHBBP09529 407 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 MYL12AP19105 171 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 TGM4P49221 684 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 EFNB1P98172 346 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 MXD1Q05195 221 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 DSG2Q14126 1118 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 FGFBP1Q14512 234 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 MOGQ16653 247 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 PLK5Q496M5 336 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 OAFQ86UD1 273 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 CRELD1Q96HD1 420 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 TPK1Q9H3S4 243 aa13.69□□□□□ -0.22
PHF3-209ENST00000509330 SPIN1Q9Y657 262 aaPredicted RBP13.69□□□□□ -0.22
PHF3-209ENST00000509330 GPX5O75715 221 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 PIPP12273 146 aaPredicted RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 NOS3P29474 1203 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 ITGADQ13349 1161 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 ATP1A4Q13733 1029 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 PHF19Q5T6S3 580 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 NIPAL1Q6NVV3 410 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 CYP4Z2PQ8N1L4 340 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 OR51L1Q8NGJ5 315 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 MCFD2Q8NI22 146 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 C9orf43Q8TAL5 461 aaPredicted RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 SAP25Q8TEE9 199 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 FGF11Q92914 225 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 ZNF524Q96C55 264 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 DEPDC7Q96QD5 511 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 MND1Q9BWT6 205 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 TAPBPLQ9BX59 468 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 PRODH2Q9UF12 536 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 PILRBQ9UKJ0 227 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 MN1Q10571 1320 aaPredicted RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 C2orf92A0A1B0GVN3 265 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 CHP2O43745 196 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 NCF4Q15080 339 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 CXXC5Q7LFL8 322 aaKnown RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 C9orf40Q8IXQ3 194 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 HOXB13Q92826 284 aaPredicted RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 EDAQ92838 391 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 ABTB1Q969K4 478 aaPredicted RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 SLIRPQ9GZT3 109 aaKnown RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 RACGAP1Q9H0H5 632 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 SLC22A11Q9NSA0 550 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 H2AFY2Q9P0M6 372 aaPredicted RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 LSM2Q9Y333 95 aaKnown RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 TTC28Q96AY4 2481 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 LY6G6EA0A0G2JKS1 128 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 A0A1B0GTQ1 180 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 GTPBP1O00178 669 aaKnown RBP13.68□□□□□ -0.22
PHF3-209ENST00000509330 DYRK3O43781 588 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 ICOSLGO75144 302 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 DDAH2O95865 285 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 TBXA2RP21731 343 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 COPZ1P61923 177 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 RHAGQ02094 409 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 CCDC157Q569K6 752 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 MEDAGQ5VYS4 303 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 ATCAYQ86WG3 371 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 C10orf53Q8N6V4 93 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 NANOGP1Q8N7R0 232 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 MARCH7Q9H992 704 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 ERVMER34-1Q9H9K5 563 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 U3KQA8 63 aa13.68□□□□□ -0.22
PHF3-209ENST00000509330 IMPA2O14732 288 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 RORAP35398 523 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 NR0B2Q15466 257 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 PWWP2BQ6NUJ5 590 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 SIRT6Q8N6T7 355 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 OR9Q1Q8NGQ5 310 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 ZNF721Q8TF20 911 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 TM9SF4Q92544 642 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 KCNS3Q9BQ31 491 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 TEX12Q9BXU0 123 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 AKIRIN1Q9H9L7 192 aaPredicted RBP13.67□□□□□ -0.22
PHF3-209ENST00000509330 POLE3Q9NRF9 147 aa13.67□□□□□ -0.22
PHF3-209ENST00000509330 CHCHD3Q9NX63 227 aaKnown RBP13.67□□□□□ -0.22
PHF3-209ENST00000509330 SIGLEC7Q9Y286 467 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms