RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SLC6A5Q9Y345 797 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 NCKAP5O14513 1909 aa8.28□□□□□ -1.08
NUP54-207ENST00000508583 DIDO1Q9BTC0 2240 aaKnown RBP8.27□□□□□ -1.08
NUP54-207ENST00000508583 OR2M5A3KFT3 312 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 CDHR4A6H8M9 788 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 CFAP73A6NFT4 308 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 FAM220BPB1ANY3 271 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 H3BML4 177 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 FXYD1O00168 92 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 GMFGO60234 142 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 NUDT7P0C024 238 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 GP1BBP13224 206 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 ZNF708P17019 499 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 AGAP20933 346 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 LHX2P50458 406 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 RAC1P63000 192 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 EEF1A1P68104 462 aaKnown RBP8.27□□□□□ -1.09
NUP54-207ENST00000508583 VEZF1Q14119 521 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 QPRTQ15274 297 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 MAPK14Q16539 360 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 VMACQ2NL98 169 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 RPS26P11Q5JNZ5 115 aaPredicted RBP8.27□□□□□ -1.09
NUP54-207ENST00000508583 EEF1A1P5Q5VTE0 462 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 C3orf33Q6P1S2 294 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 XKRXQ6PP77 449 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 CBLN3Q6UW01 205 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 ARSKQ6UWY0 536 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 C16orf89Q6UX73 402 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 ESPNLQ6ZVH7 1005 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 FGD2Q7Z6J4 655 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 ARMC8Q8IUR7 673 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 CHERPQ8IWX8 916 aaKnown RBP8.27□□□□□ -1.09
NUP54-207ENST00000508583 ULK2Q8IYT8 1036 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 OR2T12Q8NG77 320 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 OR5M9Q8NGP3 310 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 GPR119Q8TDV5 335 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 SLC26A7Q8TE54 656 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 SSC4DQ8WTU2 575 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 SLC25A43Q8WUT9 341 aaPredicted RBP8.27□□□□□ -1.09
NUP54-207ENST00000508583 RND1Q92730 232 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 RNF145Q96MT1 663 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 ZFP3Q96NJ6 502 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 SLC39A3Q9BRY0 314 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 CALHM2Q9HA72 323 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 PNPLA3Q9NST1 481 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 ALKBH4Q9NXW9 302 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 KCNE5Q9UJ90 142 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 MYO7BQ6PIF6 2116 aa8.27□□□□□ -1.09
NUP54-207ENST00000508583 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 CENPVL1A0A0U1RR11 272 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 CD8B2A6NJW9 211 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 ETV2O00321 342 aaPredicted RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 SYT5O00445 386 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 GMNNO75496 209 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 EPPINO95925 133 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 C1QCP02747 245 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 C8BP07358 591 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 FCGR2AP12318 317 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 CD1EP15812 388 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 PRKCAP17252 672 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 TCEA1P23193 301 aaKnown RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 APOBEC1P41238 236 aaKnown RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 PCBP3P57721 371 aaKnown RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 SESN3P58005 492 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 B3GALT5-AS1P59052 145 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 MXRA7P84157 204 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 FOXF1Q12946 379 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 MAPK11Q15759 364 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 ADRM1Q16186 407 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 TMEM44Q2T9K0 475 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 SPATS1Q496A3 300 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 ACSF3Q4G176 576 aaPredicted RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 SLC25A53Q5H9E4 307 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 RABL3Q5HYI8 236 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 NSUN5P2Q63ZY6 315 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 DHRS4L2Q6PKH6 230 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 ZNF836Q6ZNA1 936 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 GRINAQ7Z429 371 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 RANBP3LQ86VV4 465 aaPredicted RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 TREML1Q86YW5 311 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 ASB5Q8WWX0 329 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 ZG16BQ96DA0 208 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 WDYHV1Q96HA8 205 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 TM9SF2Q99805 663 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 PINK1Q9BXM7 581 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 ACER3Q9NUN7 267 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 DNAJB12Q9NXW2 375 aaKnown RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 SELENONQ9NZV5 590 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 ERRFI1Q9UJM3 462 aaPredicted RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 BAG5Q9UL15 447 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 MCTS1Q9ULC4 181 aaKnown RBP8.26□□□□□ -1.09
NUP54-207ENST00000508583 ZNF175Q9Y473 711 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 HRH3Q9Y5N1 445 aa8.26□□□□□ -1.09
NUP54-207ENST00000508583 HEATR5AQ86XA9 2040 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 PHF3Q92576 2039 aaKnown RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 ELOVL7A1L3X0 281 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CLEC18AA5D8T8 446 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 HSPB2A8KAH6 182 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 C17orf51A8MQB3 221 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 GSTA4O15217 222 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms