RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LIMK2P53671 638 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PKNOX1P55347 436 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 AP3S2P59780 193 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 POU6F2P78424 691 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 EEF1A1P5Q5VTE0 462 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 BLOC1S3Q6QNY0 202 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SPATA19Q7Z5L4 167 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 C10orf107Q8IVU9 208 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SLC30A8Q8IWU4 369 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 C8orf59Q8N0T1 100 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC25Q8N386 305 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FAM26EQ8N5C1 309 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 DCBLD1Q8N8Z6 715 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FBXO25Q8TCJ0 367 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 PLEKHO2Q8TD55 490 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 ACOT12Q8WYK0 555 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TANKQ92844 425 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 FBXL8Q96CD0 374 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM41AQ96HV5 264 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC3BQ96PB8 259 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 TM9SF2Q99805 663 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 DUSP13Q9UII6 198 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 B3GNT3Q9Y2A9 372 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 SLC17A4Q9Y2C5 497 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 OR51B4Q9Y5P0 310 aa2.76□□□□□ -1.97
NEDD4-208ENST00000508342 IGHV1OR21-1A0A087WYE8 117 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HSPB2A8KAH6 182 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FOXE1O00358 373 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RNASET2O00584 256 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TLX2O43763 284 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 LILRB5O75023 590 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ALDOBP05062 364 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ITGAMP11215 1152 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 IFNGR1P15260 489 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MAOAP21397 527 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MDH1P40925 334 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GABRA2P47869 451 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HLCSP50747 726 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 XKP51811 444 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ERVK-16P61578 105 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 VEZF1Q14119 521 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PON3Q15166 354 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HSPB2Q16082 182 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM44Q2T9K0 475 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ACSBG2Q5FVE4 666 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PWWP2BQ6NUJ5 590 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZFP1Q6P2D0 407 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FRMD7Q6ZUT3 714 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 BHLHA15Q7RTS1 189 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 IRF2BP2Q7Z5L9 587 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM135Q86UB9 458 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 POGLUT1Q8NBL1 392 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 BPIFB6Q8NFQ5 453 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR13C3Q8NGS6 347 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TCP10LQ8TDR4 215 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RSC1A1Q92681 617 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ABHD17AQ96GS6 310 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RBM14Q96PK6 669 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 WDR24Q96S15 920 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RANBP9Q96S59 729 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GPN1Q9HCN4 374 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FGF22Q9HCT0 170 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SNX15Q9NRS6 342 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HIF1ANQ9NWT6 349 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 C2orf42Q9NWW7 574 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 P4HTMQ9NXG6 502 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 KLHL13Q9P2N7 655 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TET1Q8NFU7 2136 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PLXND1Q9Y4D7 1925 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SCN8AQ9UQD0 1980 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 A0A0G2JMP0 313 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 A0A1W2PQ09 198 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FUOMA2VDF0 154 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ANKRD61A6NGH8 418 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TO15178 435 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ATG12O94817 140 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 COX4I1P13073 169 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CNR1P21554 472 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CD1CP29017 333 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 APOBEC3AP31941 199 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OTX1P32242 354 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RAB38P57729 211 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CSNK2A1P68400 391 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF844Q08AG5 666 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 AANATQ16613 207 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF630Q2M218 657 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SLC35F1Q5T1Q4 408 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SPINK14Q6IE38 97 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GRHL2Q6ISB3 625 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 KCNIP4Q6PIL6 250 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 AGTRAPQ6RW13 159 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZCCHC23Q6ZST2 131 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PRSS42Q7Z5A4 293 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FAM156AQ8NDB6 213 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF540Q8NDQ6 660 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 BHLHE22Q8NFJ8 381 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR4M2Q8NGB6 313 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR56A1Q8NGH5 318 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR5M1Q8NGP8 315 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 DPF1Q92782 380 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms