RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CTU2Q2VPK5 515 aaKnown RBP17.86■□□□□ 0.45
SFXN1-209ENST00000508290 HSP90B2PQ58FF3 399 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 HBMQ6B0K9 141 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 FBXO27Q8NI29 283 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 GTF2H4Q92759 462 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 CPNE4Q96A23 557 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-209ENST00000508290 REXO5Q96IC2 774 aaKnown RBP17.86■□□□□ 0.45
SFXN1-209ENST00000508290 LURAP1Q96LR2 239 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 EBF4Q9BQW3 602 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 RBM24Q9BX46 236 aaKnown RBP17.86■□□□□ 0.45
SFXN1-209ENST00000508290 SLC38A1Q9H2H9 487 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 CACYBPQ9HB71 228 aaKnown RBP17.86■□□□□ 0.45
SFXN1-209ENST00000508290 GP6Q9HCN6 339 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 SERINC1Q9NRX5 453 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 EMC9Q9Y3B6 208 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 SPIN1Q9Y657 262 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-209ENST00000508290 HCFC1P51610 2035 aa17.86■□□□□ 0.45
SFXN1-209ENST00000508290 A0A096LPI6 279 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 A8MXE2 369 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 H0YC42 278 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 OIP5O43482 229 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 EDF1O60869 148 aaKnown RBP17.85■□□□□ 0.45
SFXN1-209ENST00000508290 DBIP07108 87 aaKnown RBP17.85■□□□□ 0.45
SFXN1-209ENST00000508290 UBTFL6P0CB48 400 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-209ENST00000508290 CD8BP10966 210 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 UQCRBP14927 111 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 APCP25054 2843 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 PGM1P36871 562 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 CRATP43155 626 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 CRISP3P54108 245 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 TPD52P55327 224 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-209ENST00000508290 KCNJ10P78508 379 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 CHRNEQ04844 493 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 FADDQ13158 208 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 METTL21CQ5VZV1 264 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 C3orf33Q6P1S2 294 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 DNAJC14Q6Y2X3 702 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-209ENST00000508290 FAM214BQ7L5A3 538 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 PEX5LQ8IYB4 626 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 RFWD2Q8NHY2 731 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 SLC25A43Q8WUT9 341 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-209ENST00000508290 VPS33AQ96AX1 596 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 SPDL1Q96EA4 605 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 GMPPAQ96IJ6 420 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-209ENST00000508290 ZNF845Q96IR2 970 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-209ENST00000508290 FANCFQ9NPI8 374 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 ABCA12Q86UK0 2595 aa17.85■□□□□ 0.45
SFXN1-209ENST00000508290 TUBAL3A6NHL2 446 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 CYP7B1O75881 506 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 PLGP00747 810 aaPredicted RBP17.84■□□□□ 0.45
SFXN1-209ENST00000508290 HTR3AP46098 478 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 AGFG1P52594 562 aaKnown RBP17.84■□□□□ 0.45
SFXN1-209ENST00000508290 MVDP53602 400 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 CARD18P57730 90 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 DSTNP60981 165 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 MAPK14Q16539 360 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 SYPL1Q16563 259 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 PRAMEF8Q5VWM4 474 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 PRAMEF7Q5VXH5 474 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 ZNF440Q8IYI8 595 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 ANKFN1Q8N957 763 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 CNEP1R1Q8N9A8 125 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 PNPT1Q8TCS8 783 aaKnown RBP17.84■□□□□ 0.45
SFXN1-209ENST00000508290 SLC39A3Q9BRY0 314 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 TACO1Q9BSH4 297 aaKnown RBP17.84■□□□□ 0.45
SFXN1-209ENST00000508290 THUMPD3Q9BV44 507 aaKnown RBP17.84■□□□□ 0.45
SFXN1-209ENST00000508290 ACER3Q9NUN7 267 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 ELOVL5Q9NYP7 299 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 CCDC167Q9P0B6 97 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 CORO2BQ9UQ03 480 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 GMEB1Q9Y692 573 aa17.84■□□□□ 0.45
SFXN1-209ENST00000508290 NUP214P35658 2090 aaPredicted RBP17.84■□□□□ 0.45
SFXN1-209ENST00000508290 DSPPQ9NZW4 1301 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 UQCRHLA0A096LP55 91 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 PRAMEF27A3QJZ7 478 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 FAAHO00519 579 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 TNFSF11O14788 317 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 CXCL13O43927 109 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 SS18L1O75177 396 aaPredicted RBP17.83■□□□□ 0.44
SFXN1-209ENST00000508290 BMP2P12643 396 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 NID1P14543 1247 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 IL7RP16871 459 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 IL11P20809 199 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 RPS4Y1P22090 263 aaKnown RBP17.83■□□□□ 0.44
SFXN1-209ENST00000508290 SLC7A1P30825 629 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 APOBEC1P41238 236 aaKnown RBP17.83■□□□□ 0.44
SFXN1-209ENST00000508290 KIR2DL2P43627 348 aaPredicted RBP17.83■□□□□ 0.44
SFXN1-209ENST00000508290 MAP2K6P52564 334 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 RNPS1Q15287 305 aaKnown RBP17.83■□□□□ 0.44
SFXN1-209ENST00000508290 GUSBP1Q15486 140 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 NDUFAF6Q330K2 333 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 COX20Q5RI15 118 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 LRIF1Q5T3J3 769 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 LUZP2Q86TE4 346 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 OR6K3Q8NGY3 331 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 TSPEARQ8WU66 669 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 WDR60Q8WVS4 1066 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 OSTF1Q92882 214 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 STARD4Q96DR4 205 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 PAIP1Q9H074 479 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms