RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 USP43Q70EL4 1123 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 CLEC14AQ86T13 490 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 INO80EQ8NBZ0 244 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 CATSPER1Q8NEC5 780 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 PPP4R1Q8TF05 950 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ZFP3Q96NJ6 502 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 GUCD1Q96NT3 240 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ZIM3Q96PE6 472 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ACTRT3Q9BYD9 372 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 KAT8Q9H7Z6 458 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 INPP5EQ9NRR6 644 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 IMPACTQ9P2X3 320 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 MAP3K2Q9Y2U5 619 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 TMED7Q9Y3B3 224 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ZAR1LA6NP61 321 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 TFECO14948 347 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 PRKRAO75569 313 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 RGS11O94810 467 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 PAPSS2O95340 614 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 SERPINA1P01009 418 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 IDH2P48735 452 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 AGTR2P50052 363 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 FGF8P55075 233 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 RBX1P62877 108 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 SSBP2P81877 361 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 COL9A3Q14050 684 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 TOMM34Q15785 309 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 LY6G6FQ5SQ64 297 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 OTUD3Q5T2D3 398 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 OR2G6Q5TZ20 316 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF621Q6ZSS3 439 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 CCDC190Q86UF4 302 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 AMIGO3Q86WK7 504 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 KIRREL3Q8IZU9 778 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 PARP16Q8N5Y8 322 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 POC1AQ8NBT0 407 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 LGALS12Q96DT0 336 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 NSL1Q96IY1 281 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF597Q96LX8 424 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 DEFB118Q96PH6 123 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 OR6C1Q96RD1 312 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 FZD3Q9NPG1 666 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 CCDC59Q9P031 241 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 KIF25Q9UIL4 384 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF337Q9Y3M9 751 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 FKBP7Q9Y680 259 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 LRRC37A3O60309 1634 aa6.85□□□□□ -1.31
PDGFRA-206ENST00000508170 XRN1Q8IZH2 1706 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 PIK3C2AO00443 1686 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 ELOA3CA0A087WX78 387 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 LRRC3CA6NJW4 275 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 ELOA3DA6NLF2 546 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 CCRL2O00421 344 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 IL18BPO95998 194 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 NR3C1P04150 777 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 DBHP09172 617 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 GLI4P10075 376 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 SAGP10523 405 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 FCER1AP12319 257 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 FCARP24071 287 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 PPIFP30405 207 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 CSNK1A1P48729 337 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 XKP51811 444 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 PLA2G16P53816 162 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 MBTD1Q05BQ5 628 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 NDUFA9Q16795 377 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 ARL13AQ5H913 290 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 NKAPLQ5M9Q1 402 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 SAMD4BQ5PRF9 694 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 PRAMEF17Q5VTA0 474 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 DENND2CQ68D51 928 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 EMBQ6PCB8 327 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 TEPPQ6URK8 271 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 C22orf34Q6ZV56 151 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 DHFR2Q86XF0 187 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 DMRTC2Q8IXT2 367 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 IZUMO1Q8IYV9 350 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 FCAMRQ8WWV6 532 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 ZC3HAV1LQ96H79 300 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 DCAF5Q96JK2 942 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 DCLRE1CQ96SD1 692 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF2Q9BSG1 426 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 DPAGT1Q9H3H5 408 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 SMPXQ9UHP9 88 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 DUSP13Q9UII6 198 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 ICAM5Q9UMF0 924 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 RGPD8O14715 1765 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 USP54Q70EL1 1684 aa6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 ATXN2Q99700 1313 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-206ENST00000508170 SHISA8B8ZZ34 492 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 hCG_2039718K7EN88 272 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 SLC19A2O60779 497 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 DEAF1O75398 565 aaPredicted RBP6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 CTDNEP1O95476 244 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 CT62P0C5K7 136 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 NBEAP1P0C6P0 100 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 LINC00614P0C842 121 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 EPCAMP16422 314 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 COMTP21964 271 aa6.84□□□□□ -1.32
PDGFRA-206ENST00000508170 GEMP55040 296 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms