RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 L3HYPDHQ96EM0 354 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 TMEM237Q96Q45 408 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 BBS4Q96RK4 519 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 TRMOQ9BU70 441 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 CXorf36Q9H7Y0 433 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 BRF2Q9HAW0 419 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 BCO1Q9HAY6 547 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 HHATLQ9HCP6 504 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 MYNNQ9NPC7 610 aa12.21□□□□□ -0.45
DDR1-260ENST00000507533 C19orf53Q9UNZ5 99 aaPredicted RBP12.21□□□□□ -0.45
DDR1-260ENST00000507533 A0A087WV62 115 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 IGHV3-15A0A0B4J1V0 119 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 GXYLT2A0PJZ3 443 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 LRP5LA4QPB2 252 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 ALG1L2C9J202 215 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 C9JVG2 144 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 M0R1B8 84 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 KCNH1O95259 989 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 MYZAPP0CAP1 466 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 ENPP1P22413 925 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 DNAJB13P59910 316 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 NAA20P61599 178 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 TMEM107Q6UX40 140 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 RPS27LQ71UM5 84 aaKnown RBP12.2□□□□□ -0.46
DDR1-260ENST00000507533 ZNF540Q8NDQ6 660 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 OR4F6Q8NGB9 312 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 TCP10LQ8TDR4 215 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 ZNF775Q96BV0 537 aaPredicted RBP12.2□□□□□ -0.46
DDR1-260ENST00000507533 ZBTB9Q96C00 473 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 SH3YL1Q96HL8 342 aaPredicted RBP12.2□□□□□ -0.46
DDR1-260ENST00000507533 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 KLHDC3Q9BQ90 382 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 BPESC1Q9GZL8 116 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 C3orf14Q9HBI5 128 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 SSU72Q9NP77 194 aaKnown RBP12.2□□□□□ -0.46
DDR1-260ENST00000507533 OXSMQ9NWU1 459 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 KLHL9Q9P2J3 617 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 SLC17A7Q9P2U7 560 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 VPS29Q9UBQ0 182 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 MCM8Q9UJA3 840 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 ING1Q9UK53 422 aaPredicted RBP12.2□□□□□ -0.46
DDR1-260ENST00000507533 ACTL7BQ9Y614 415 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 SLC25A15Q9Y619 301 aa12.2□□□□□ -0.46
DDR1-260ENST00000507533 A0A0G2JK05 382 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 A0A1W2PR80 420 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 SERINC4A6NH21 518 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 FAM157AC9JC47 383 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 UPK1AO00322 258 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 RGS14O43566 566 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 TYROBPO43914 113 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 EFNA2O43921 213 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 RAD51DO75771 328 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 OXSR1O95747 527 aaPredicted RBP12.19□□□□□ -0.46
DDR1-260ENST00000507533 OTCP00480 354 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 JUNP05412 331 aaKnown RBP12.19□□□□□ -0.46
DDR1-260ENST00000507533 TSPAN8P19075 237 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 GABRA3P34903 492 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 EIF1P41567 113 aaKnown RBP12.19□□□□□ -0.46
DDR1-260ENST00000507533 HEPACAMQ14CZ8 416 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 TMEM176BQ3YBM2 270 aaPredicted RBP12.19□□□□□ -0.46
DDR1-260ENST00000507533 GGTA1PQ4G0N0 100 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 PRR31Q5SQ13 230 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 FAM219BQ5XKK7 198 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 ZNF100Q8IYN0 542 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 CCNYL1Q8N7R7 359 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 LINC01356Q8N9X3 169 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 OR4C3Q8NH37 302 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 PIK3R3Q92569 461 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 FBXO17Q96EF6 278 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 PSD2Q9BQI7 771 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 LMF2Q9BU23 707 aaKnown RBP12.19□□□□□ -0.46
DDR1-260ENST00000507533 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 TMBIM4Q9HC24 238 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 MYOZ1Q9NP98 299 aaPredicted RBP12.19□□□□□ -0.46
DDR1-260ENST00000507533 DDX18Q9NVP1 670 aaKnown RBP12.19□□□□□ -0.46
DDR1-260ENST00000507533 SNX6Q9UNH7 406 aa12.19□□□□□ -0.46
DDR1-260ENST00000507533 GNG14A0A1W2PPG7 69 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 CIB4A0PJX0 185 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 GJE1A6NN92 205 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 MYO1GB0I1T2 1018 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 PPP6CO00743 305 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 ZNF195O14628 629 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 PCDH7O60245 1069 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 TRIM13O60858 407 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 PSMG1O95456 288 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 LINGO3P0C6S8 592 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 NCBP2P52298 156 aaKnown RBP eCLIP12.18□□□□□ -0.46
DDR1-260ENST00000507533 PHC1P78364 1004 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 RASGEF1BQ0VAM2 473 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 FOXF1Q12946 379 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 PCLAFQ15004 111 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 SWI5Q1ZZU3 235 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 LIPMQ5VYY2 423 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 RINLQ6ZS11 566 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 HDXQ7Z353 690 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 C10orf107Q8IVU9 208 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 OR2L13Q8N349 312 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 ATP6V1C2Q8NEY4 427 aa12.18□□□□□ -0.46
DDR1-260ENST00000507533 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms