RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ABTB1Q969K4 478 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MPP4Q96JB8 637 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 GNRHR2Q96P88 292 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 KCTD14Q9BQ13 255 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF559Q9BR84 538 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 HES7Q9BYE0 225 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 SLC19A3Q9BZV2 496 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 ANKRD19PQ9H560 264 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MED17Q9NVC6 651 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 DNAJB12Q9NXW2 375 aaKnown RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 SAMD4AQ9UPU9 718 aaKnown RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 HDGFL3Q9Y3E1 203 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 KCNE3Q9Y6H6 103 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 INTS1Q8N201 2190 aaKnown RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 DOCK7Q96N67 2140 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 NPIPA5E9PKD4 350 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ADAMDEC1O15204 470 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 SCO2O43819 266 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 SLC19A2O60779 497 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ZIC2O95409 532 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-205ENST00000506880 GP1BBP13224 206 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ABOP16442 354 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF708P17019 499 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ITGA2P17301 1181 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 HK1P19367 917 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 KDELR2P33947 212 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 TIMP3P35625 211 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 CA7P43166 264 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 RFX3P48380 749 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 KCNJ5P48544 419 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 NCALDP61601 193 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 SELENOWP63302 87 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 MXRA7P84157 204 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF117Q03924 483 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 LIPEQ05469 1076 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 CRYZQ08257 329 aaKnown RBP7.67□□□□□ -1.18
PDGFC-205ENST00000506880 MERTKQ12866 999 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 EPS8Q12929 822 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 BNIP1Q12981 228 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 NRF1Q16656 503 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 C4orf17Q53FE4 359 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 OR2A2Q6IF42 318 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 SSX8Q7RTT4 187 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 PRICKLE2Q7Z3G6 844 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 LACC1Q8IV20 430 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 SLC43A2Q8N370 569 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 POU5F2Q8N7G0 328 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 NFKBIDQ8NI38 313 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 PNPT1Q8TCS8 783 aaKnown RBP7.67□□□□□ -1.18
PDGFC-205ENST00000506880 STK35Q8TDR2 534 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 JSRP1Q96MG2 331 aaPredicted RBP7.67□□□□□ -1.18
PDGFC-205ENST00000506880 SFXN2Q96NB2 322 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 TM9SF2Q99805 663 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 POTEKPQ9BYX7 375 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 TRIM15Q9C019 465 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ADAM19Q9H013 955 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 DSN1Q9H410 356 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 IKZF5Q9H5V7 419 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 RUBCNLQ9H714 662 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 SLC24A3Q9HC58 644 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 GALNT9Q9HCQ5 603 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ARL8BQ9NVJ2 186 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 SELENONQ9NZV5 590 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 ACTR3BQ9P1U1 418 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 CD300AQ9UGN4 299 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 NPIPA1Q9UND3 350 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 TRAPPC4Q9Y296 219 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 KIAA1549Q9HCM3 1950 aa7.67□□□□□ -1.18
PDGFC-205ENST00000506880 A0A0G2JMM0 328 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 A0A1W2PPB8 328 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 A0A1W2PRS3 328 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 PINLYPA6NC86 204 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 KIR3DP1A8MWS1 328 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 B2RBV5 119 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 M0QX08 132 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 EBAG9O00559 213 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 NME4O00746 187 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 GNB5O14775 395 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 GSTA4O15217 222 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 OR2T1O43869 369 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 EIF1BO60739 113 aaKnown RBP7.66□□□□□ -1.18
PDGFC-205ENST00000506880 BCAS1O75363 584 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-205ENST00000506880 TRAPPC6AO75865 159 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 EPPINO95925 133 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 IL18BPO95998 194 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 F10P00742 488 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 UMPSP11172 480 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 PRKCAP17252 672 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 GGT1P19440 569 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 PSMA4P25789 261 aaKnown RBP7.66□□□□□ -1.18
PDGFC-205ENST00000506880 MST1P26927 711 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CPOXP36551 454 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 POLR2HP52434 150 aaKnown RBP7.66□□□□□ -1.18
PDGFC-205ENST00000506880 SMIM11AP58511 58 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CSNK2A1P68400 391 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CAPRIN1Q14444 709 aaKnown RBP7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CD226Q15762 336 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 MAPK14Q16539 360 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 ANKDD1AQ495B1 522 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 RABL3Q5HYI8 236 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms