RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 POC1BQ8TC44 478 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 SFXN5Q8TD22 340 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 EMCNQ9ULC0 261 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 JMJD1CQ15652 2540 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 A8MV72 311 aaPredicted RBP18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 SOD3P08294 240 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 LINC00032P0C843 101 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 NID1P14543 1247 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 PRKCAP17252 672 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 ACVR1BP36896 505 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 ATP6AP1LQ52LC2 224 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 RFTN2Q52LD8 501 aaPredicted RBP18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 KLHL26Q53HC5 615 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 ZNF385BQ569K4 471 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 NUFIP2Q7Z417 695 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 HIPK1Q86Z02 1210 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 OR2W6PQ8NHA6 318 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 RFWD2Q8NHY2 731 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 ST8SIA1Q92185 356 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 C16orf58Q96GQ5 468 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 BAIAP2L1Q9UHR4 511 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 ATP6V1HQ9UI12 483 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 ICAM5Q9UMF0 924 aa18.67■□□□□ 0.58
SQSTM1-210ENST00000506042 VPS13CQ709C8 3753 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 ZNF724A8MTY0 619 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 LSM1O15116 133 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 PGCP20142 388 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 MAD2L1Q13257 205 aaPredicted RBP18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 FBXL14Q8N1E6 418 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 UBE2J2Q8N2K1 259 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 KBTBD8Q8NFY9 601 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 KIF18AQ8NI77 898 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 OIT3Q8WWZ8 545 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 OR5B2Q96R09 309 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 SRXN1Q9BYN0 137 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 TRIM2Q9C040 744 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 EXD2Q9NVH0 621 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 CDC42EP3Q9UKI2 254 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 ADAM21Q9UKJ8 722 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 PCDHGB4Q9UN71 923 aa18.66■□□□□ 0.58
SQSTM1-210ENST00000506042 A0A1W2PPM1 405 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 CIB4A0PJX0 185 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 GPR171O14626 319 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 ANKRD28O15084 1053 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 LYZL6O75951 148 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 AGR2O95994 175 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 BCKDHAP12694 445 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 KRT4P19013 534 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 PRPS1L1P21108 318 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 PTAFRP25105 342 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 SLC25A53Q5H9E4 307 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 C1QTNF12Q5T7M4 302 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 KANK2Q63ZY3 851 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 Q6ZSR9 355 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 ZAR1Q86SH2 424 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 DTX2Q86UW9 622 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 GPR119Q8TDV5 335 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 MZB1Q8WU39 189 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 TWIST2Q8WVJ9 160 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 UBLCP1Q8WVY7 318 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 PSD2Q9BQI7 771 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 TRAF4Q9BUZ4 470 aaPredicted RBP18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 AMBRA1Q9C0C7 1298 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 LPAR3Q9UBY5 353 aa18.65■□□□□ 0.58
SQSTM1-210ENST00000506042 SULT2B1O00204 365 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 ABCD4O14678 606 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 CYTIPO60759 359 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 STX11O75558 287 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 FGF4P08620 206 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 CSF3P09919 207 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 DHRS4L1P0CG22 281 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 SOAT1P35610 550 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 QPRTQ15274 297 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 RAB35Q15286 201 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 TSC22D1Q15714 1073 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 ATAD3BQ5T9A4 648 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 OR7E24Q6IFN5 339 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 PIAS4Q8N2W9 510 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 LILRB1Q8NHL6 650 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 OTUB1Q96FW1 271 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 NPAS1Q99742 590 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 NMUR2Q9GZQ4 415 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 TRAF6Q9Y4K3 522 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 DNAJC15Q9Y5T4 150 aa18.64■□□□□ 0.57
SQSTM1-210ENST00000506042 CCT8L1PA6NM43 557 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 SSX4O60224 188 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 NPHS1O60500 1241 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 CYP7B1O75881 506 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 IGHV4-39P01824 125 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 SLC25A16P16260 332 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 SERPINB5P36952 375 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 CHRNB3Q05901 458 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 SLC22A25Q6T423 547 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 CBLN3Q6UW01 205 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 EIF3MQ7L2H7 374 aaKnown RBP18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 C16orf62Q7Z3J2 963 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 C10orf107Q8IVU9 208 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 EIF1ADQ8N9N8 165 aaKnown RBP18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 MAPK1IP1LQ8NDC0 245 aa18.63■□□□□ 0.57
SQSTM1-210ENST00000506042 OR2T11Q8NH01 316 aa18.63■□□□□ 0.57
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