RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 LINGO3P0C6S8 592 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF17P17021 662 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 PGCP20142 388 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 GNLYP22749 145 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 ADH6P28332 368 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 AQP1P29972 269 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 GCKP35557 465 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC6A8P48029 635 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF41P51814 821 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 MXRA7P84157 204 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC25A3Q00325 362 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 MRPL49Q13405 166 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 CBFBQ13951 182 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 SPATS1Q496A3 300 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC25A53Q5H9E4 307 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 VASNQ6EMK4 673 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 ARSKQ6UWY0 536 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 ARMC8Q8IUR7 673 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 RBM15BQ8NDT2 890 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 FAM57AQ8TBR7 257 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 KLHDC3Q9BQ90 382 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 PIGQQ9BRB3 760 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 PINK1Q9BXM7 581 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 RSPO3Q9BXY4 272 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 C1orf21Q9H246 121 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 RLIMQ9NVW2 624 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 DNAJB12Q9NXW2 375 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 ADA2Q9NZK5 511 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC6A5Q9Y345 797 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 CACNA1CQ13936 2221 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 MYO18BQ8IUG5 2567 aa10.77□□□□□ -0.68
PDLIM5-208ENST00000504489 OR2M5A3KFT3 312 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 NPIPA2E9PIF3 369 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 NPIPA3F8WFD2 350 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 J3QKU1 62 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 TPST1O60507 370 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC19A2O60779 497 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 NTN1O95631 604 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 STSP08842 583 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 HSD17B1P14061 328 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 ABOP16442 354 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 PRKCAP17252 672 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 BMP7P18075 431 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 KDELR2P33947 212 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 EIF1P41567 113 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 CCR4P51679 360 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 DLX5P56178 289 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 CRYZQ08257 329 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 DMTNQ08495 405 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 QPRTQ15274 297 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 TOMM34Q15785 309 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 SAMD4BQ5PRF9 694 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 RAET1LQ5VY80 246 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 AAGABQ6PD74 315 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 RINLQ6ZS11 566 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNF550Q7Z398 422 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 DEFB107AQ8IZN7 70 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 GTPBP8Q8N3Z3 284 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 TNIP2Q8NFZ5 429 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 RASSF5Q8WWW0 418 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 TMEM234Q8WY98 164 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 ST8SIA1Q92185 356 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 ABTB1Q969K4 478 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 TAMM41Q96BW9 452 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNF524Q96C55 264 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 MRGPRX4Q96LA9 322 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 SFXN2Q96NB2 322 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 CDRT15Q96T59 188 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 TIMP4Q99727 224 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 KCTD14Q9BQ13 255 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 UGT2B28Q9BY64 529 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 EVA1AQ9H8M9 152 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 GMPR2Q9P2T1 348 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 CD300AQ9UGN4 299 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 ACAD8Q9UKU7 415 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 VDAC3Q9Y277 283 aa10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 RPH3AQ9Y2J0 694 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 SPTBN1Q01082 2364 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-208ENST00000504489 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 CFAP73A6NFT4 308 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 SYT5O00445 386 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 PRRG2O14669 202 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNHIT1O43257 154 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 ADAM11O75078 769 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 EPPINO95925 133 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 LGI1O95970 557 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 IFNA14P01570 189 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 C8BP07358 591 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 PEPDP12955 493 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 UQCRBP14927 111 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 CPN1P15169 458 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 CD247P20963 164 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 TCEA1P23193 301 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 PSMA4P25789 261 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 HTR1EP28566 365 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 ACAA2P42765 397 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 UQCRFS1P47985 274 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 KCNJ5P48544 419 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 LHX2P50458 406 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 CRYBA2P53672 197 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms